Gene
| Gene Model ID | pfu_aug1.0_23694.1_54914 |
|---|---|
| Locus | scaffold23694.1 : 1 ... 12917 : - |
| To GenomeBrowser | scaffold23694.1:1..12917 |
| Genes list of scaffold | scaffold23694.1 |
| Synonym | pfu_aug2.0_433.1_10770 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23694.1_54914.t1 | 1 | 1 | NACHT | 105 | 274 | 3.9e-13 | 49.4 | 1.3e-16 | 9.8e-13 | 48.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23694.1_54914.t1 | gi|260801964|ref|XP_002595864.1| | hypothetical protein BRAFLDRAFT_84232 [Branchiostoma floridae] | 3.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_23694.1_54914.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23694.1_54914.t1 atggttcagttaaagaagaatttgattcaagtaaagaaacgtcttcggataagactttcaaagagaatgaaatcgaaaaa ctttcagagcgactgaagaacatgaataaatatgagacagatatgttgcctttgtcgcctttacaagaggaatacaaact gcctgtcgagcagctgttttcctctttgatcatgagagaggaccttaaatacaacagtagactaagaggaccaatgatta atggggagtcacatgaaaacaaagagatcaagtctccgaaggatatttttacagtcaatgatgatgaacctgcaagaagg atatacatccaaggcgatgctgcgatgggtaaaacaacatactgcttatgggtattgaaacagtggtgtgatgccaaaga aaactgcactgcatcgcaatctgattgggtaaaagctctaagtgaatttgattttgcgtttttcttaccaatgcggtcag tacatccttcaagagtcttggtgaaggagatgatttgtaaagacctactacaagaagaacctcatctgcataaagtggtg gaacacgtgcttttgaatgataagtatcgttgtctagttatcttggatggtatggacgaatggaatcaggataaaaatac gttggagcagctgagatgtaaagcattacccaactttgataacatatcaaactgtgtttatttaatctcaatgcgaaaat ggtggtttcctaccgtgtcgacctttcttcggaacaatgacaaagtgattgaaataaaggggttagaagacgaatcaatc acgcaagtgattgagaaagtactggttcatcactttggattcacacaagacacaggcgattatagaaggaaccatgattc aatcatggaaaaactgacaaacaaaactctaaggtcatttattcaaattccccttttagctgttgcttgtactcaaatat ggtgtagaaatgaagaagcaggtgacagtttgacaaagttgtatacagccatgatagaaattctgctggagagggaatat aaaaagcatccgctcaggaatacgctcataagtagagaagaatgccaaaaacgaataccaaaaattttggctgaaaatga aaacattgctggctgtttttctgtattgttgaagatgggaaaagcagcattttataacttagtatctaagaaacctagag taaaatataacggagtagttttaaagaggtatctctccgaaacagaatacaagtttgcacttgatgttggttttatcagt caggtagcatcaaacagtgtagcgaaaaagaaaacaagtgttcattttttccattcatcagtacaagagttccttgctgc aattttcatcattgtcaagacagattcggctaattccttctgtagtaagcacctgacaaacatgacagaaataatggcac gctccgatgtaattatgttcattttcggcatgtgtccttcccttggtattaaaatattgaagcatgtcgaccttgtgacc acaaacagctgggaaataactgcatatcgaaactcgtcagaatgtagtagtgtagtagcagaactatataggataaaaat gtgttggtatagagagtttcgtcaagcacaggccgaccatcactcaacgttcccagtgtctgatgtctatctgtcaaagt acagcgacatggaaacagtgaggctgagtagggaaatccttttgcatcaaaatgaacatatcttatctctatatttatca atggtaccaaccaataaggagtatggtattacgaacgaagagatggatttgatcgtgtcaaaacgagacaactcgctagt caagctctatatcaacggatttaatactgatagaacaataacgaggatctgcggaccacatctgacaaatctatacattt acatggtcagagttcaagaattggctgtcccaaaggaagttatttgtaatccgacagtgttagagaaggttgagcttttt ggtgttacccttaagaacagatcacttggtcttaattatagcatggaggaattaatgaccgtaaaattatggtcagtgca tatgtcagcagaagaatgggaaatgttctggctgagtcttagaagtgacagtgtcaaggctgttcattatgaactgagaa gcacaaatattgatgaccaatcattgagaaatattttgtccgaatctcgctgtactgttagattgtacgctatggatgag attagagggtgtcatatacattttatttctggtggaagtcctttacctctatgttatgatgttcgtgctgatggtggtcg tgacgtaggtgataatggtgtatggaatcagaaacacattggtgtttgcaaggagggaaatgatgatgatgatgatgatg atgatgatgatgatgatgatgacggcggcagttatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgat gatgatgacgcggttatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgataatgatgga ggaggagaatatatataaatcttga |
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Protein
| Protein ID | pfu_aug1.0_23694.1_54914.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23694.1_54914.t1 GSVKEEFDSSKETSSDKTFKENEIEKLSERLKNMNKYETDMLPLSPLQEEYKLPVEQLFSSLIMREDLKYNSRLRGPMIN GESHENKEIKSPKDIFTVNDDEPARRIYIQGDAAMGKTTYCLWVLKQWCDAKENCTASQSDWVKALSEFDFAFFLPMRSV HPSRVLVKEMICKDLLQEEPHLHKVVEHVLLNDKYRCLVILDGMDEWNQDKNTLEQLRCKALPNFDNISNCVYLISMRKW WFPTVSTFLRNNDKVIEIKGLEDESITQVIEKVLVHHFGFTQDTGDYRRNHDSIMEKLTNKTLRSFIQIPLLAVACTQIW CRNEEAGDSLTKLYTAMIEILLEREYKKHPLRNTLISREECQKRIPKILAENENIAGCFSVLLKMGKAAFYNLVSKKPRV KYNGVVLKRYLSETEYKFALDVGFISQVASNSVAKKKTSVHFFHSSVQEFLAAIFIIVKTDSANSFCSKHLTNMTEIMAR SDVIMFIFGMCPSLGIKILKHVDLVTTNSWEITAYRNSSECSSVVAELYRIKMCWYREFRQAQADHHSTFPVSDVYLSKY SDMETVRLSREILLHQNEHILSLYLSMVPTNKEYGITNEEMDLIVSKRDNSLVKLYINGFNTDRTITRICGPHLTNLYIY MVRVQELAVPKEVICNPTVLEKVELFGVTLKNRSLGLNYSMEELMTVKLWSVHMSAEEWEMFWLSLRSDSVKAVHYELRS TNIDDQSLRNILSESRCTVRLYAMDEIRGCHIHFISGGSPLPLCYDVRADGGRDVGDNGVWNQKHIGVCKEGNDDDDDDD DDDDDDDGGSYDDDDDDDDDDDDDDDDDDAVMMMMMMMMMMMMMMMMMMIMMEEENIYKS |
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