Gene
| Gene Model ID | pfu_aug1.0_237.1_50743 |
|---|---|
| Locus | scaffold237.1 : 89086 ... 106187 : + |
| To GenomeBrowser | scaffold237.1:89086..106187 |
| Genes list of scaffold | scaffold237.1 |
| Synonym | pfu_aug2.0_23.1_10111 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_237.1_50743.t1 | 1 | 1 | Methyltransf_31 | 27 | 134 | 5.8e-17 | 61.6 | 4.6e-20 | 8.6e-17 | 61.1 |
| pfu_aug1.0_237.1_50743.t1 | 1 | 1 | Methyltransf_23 | 40 | 116 | 7.1e-06 | 25.8 | 5.6e-09 | 1.0e-05 | 25.3 |
| pfu_aug1.0_237.1_50743.t1 | 1 | 1 | Methyltransf_11 | 43 | 101 | 2.7e-07 | 30.9 | 2.7e-10 | 5.0e-07 | 30.1 |
| pfu_aug1.0_237.1_50743.t1 | 1 | 1 | Ubie_methyltran | 43 | 103 | 1.6e-06 | 27.4 | 1.8e-09 | 3.3e-06 | 26.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_237.1_50743.t1 | gi|118092981|ref|XP_421735.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_237.1_50743.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_237.1_50743.t1 atgtaccgaaacgacctaaatcatgcaccgaaacgtctttgtaccatgtaccgaaacgactttcttctaccatatattgc agtagctcgcaagtacatagactaccatacacagaagtttggctttgacaagccaaatatagactttgtgcagggataca tagagaaattgacggaggccggaatcaaagaaaacttctacgacatcattatatcaaactgtgtcatcaacttatctcca gacaaaaaagctgttttgagagatgcatacaaagttttgaaggttggaggtgaattgtacttcagtgatgtctacacaga ttcacatctgacagaggaaattaggaagcatgaagtcttatggggtgaatgcatatcaggggccctacactggaaggagt tatttgacttggccgatgagctcgggttcagtagaccataccttgtcactgcctctcctatagacatagagagggaggac ttccagaaaatattgggagaggccaagtttgtatcagccacatacaggttgttcaagctaccagcaacaaaggaaagcag tacacaagtaatctataatggtgagatagagggatatgaagatcagctagtctttgaacatgataatgtgttcaagaaaa gtgatgtagtgtgtgtgggaggtgacatcgtgacagccctngaaagcttcacgattttgtga |
|
Protein
| Protein ID | pfu_aug1.0_237.1_50743.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_237.1_50743.t1 MYRNDLNHAPKRLCTMYRNDFLLPYIAVARKYIDYHTQKFGFDKPNIDFVQGYIEKLTEAGIKENFYDIIISNCVINLSP DKKAVLRDAYKVLKVGGELYFSDVYTDSHLTEEIRKHEVLWGECISGALHWKELFDLADELGFSRPYLVTASPIDIERED FQKILGEAKFVSATYRLFKLPATKESSTQVIYNGEIEGYEDQLVFEHDNVFKKSDVVCVGGDIVTAXESFTIL |
|