Gene
| Gene Model ID | pfu_aug1.0_23711.1_04324 |
|---|---|
| Locus | scaffold23711.1 : 2416 ... 8725 : - |
| To GenomeBrowser | scaffold23711.1:2416..8725 |
| Genes list of scaffold | scaffold23711.1 |
| Synonym | pfu_aug2.0_401.1_04105 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23711.1_04324.t1 | 1 | 1 | ARGLU | 18 | 168 | 0.0 | 164.7 | 0.0 | 0.0 | 164.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23711.1_04324.t1 | gi|260796355|ref|XP_002593170.1| | hypothetical protein BRAFLDRAFT_120154 [Branchiostoma floridae] | 8.40779e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_23711.1_04324.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23711.1_04324.t1 atgattattgaaaattatcaaaatgcgtttatccagtttccgaagaaacaaaaagaactggaggaaaagttaatcgagga ggaggtggccaggcgagtagaggaacttgttgccaaaagggtggaagaagaactagagaggagaaaagacgaaatagagg cggaagttagacgtagggttgaggaggccaagaaaattatggaaaaacaaatgttagaggagctggaacggcaaagggag gcagagttagaggctcagaaaaagaaggaggaggaagagcgcaaaaaacgtcaggatttggagaaaataatggaggaaaa caatcgtaaaattgaggaggctcagaaaaaattagctgaggaacaactcaaacttgttgaagagcagcgaagaatgttag aagaaaaacaaagaatggaagatgaagaaagacgaagaactaagcgagaacaagaaatgatccttaataagaagaatgct cgtccaaaagtttcgtttagtctaggaggaaaatag |
|
Protein
| Protein ID | pfu_aug1.0_23711.1_04324.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23711.1_04324.t1 MIIENYQNAFIQFPKKQKELEEKLIEEEVARRVEELVAKRVEEELERRKDEIEAEVRRRVEEAKKIMEKQMLEELERQRE AELEAQKKKEEEERKKRQDLEKIMEENNRKIEEAQKKLAEEQLKLVEEQRRMLEEKQRMEDEERRRTKREQEMILNKKNA RPKVSFSLGGK |
|