Gene
| Gene Model ID | pfu_aug1.0_23715.1_18950 |
|---|---|
| Locus | scaffold23715.1 : 1 ... 9115 : - |
| To GenomeBrowser | scaffold23715.1:1..9115 |
| Genes list of scaffold | scaffold23715.1 |
| Synonym | pfu_aug2.0_289.1_30566 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23715.1_18950.t1 | 1 | 1 | RVT_1 | 84 | 328 | 4.9e-39 | 133.8 | 9.79508e-43 | 7.3e-39 | 133.3 |
| pfu_aug1.0_23715.1_18950.t1 | 2 | 1 | LSM | 179 | 194 | 3.2e-07 | 29.8 | 0.43 | 3200.0 | -2.3 |
| pfu_aug1.0_23715.1_18950.t1 | 2 | 2 | LSM | 429 | 458 | 3.2e-07 | 29.8 | 1.8e-10 | 1.4e-06 | 27.7 |
Transcript
| Transcript ID | pfu_aug1.0_23715.1_18950.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23715.1_18950.t1 atgccaaacaagggaacaagcccatatcctgacatgccaagcatccacgtcagtgtaaaaggagttcttaccctcttgaa aaacatcaacatcaacaaagctacaggtccagacgcattaccagcaaggctattgcatgattacgcagaacatctagcac caatcttgacctctatatttcaatcatctctagataaaggacggatcccagaggactggcgtcaagcgagcatagtgcct atcttcaagaaaggagacaaacatctagcatctaactatcgaccagtctccctaacatccataacatgtaagctattgga gcatatagtgcatagccaggtaatggatttcctagaccaacaatccattcttcatgacaatcaacacgggttccgatcta agaggtcctgtgaatcacaattggtctacactattaatgagatagcacgaaacctaggggagagaggtcaagtagatatc atcctgcttgacttctcaaaagcttttgataaagttccccaccatcgttttgcacacaaacttggatactatggcatcag aggtagcactctccaatggattagggacttcctcacaaacagaacccaacaagttcttctggaaggacacaagtcatcca ccgcacctgtgctatccggggttccgcaaggaacggtgttaggacctctgctatttctcctctacatcaacgatttgcca gaaaggacaacatcagatgcacgtttgtttgcggacgactgtcttctttatactccagttaagagcagatcagacaccga aacgctgcagaaagacttggattcactcgtcaagtgggaggaggaatggcatatggcttttcatccagaaaagtgggttg tcatccaggttaccaacaaaaggatgcccaccaatgggaactataacatccatggccatttgttagatgtggtggactcc agcaaatacctaggagttaacatcagtaaagatctgcgatgggataaccacatcaacagcataacatccaaggcaaatag gaccctaggattcattagaaggaatatgaggggatgtaggaagcaggcaagggtagcagcctatcaaggtcttgtacgcc cgacacttgaatatgcatgcgcagcatgggacccgtggagctccaagcatatacaccagctggagaaagttcagagaagg gcagcgcgttttgtcacccggaactaccatgatcgtcacccagttgccgttatcattgttaagaacagctgtcaatcacc ctatgtagagttaaagaatggagagacatataacggacatcttgttagctgtgataactggatgaatattaatctcagag aagttatctgtacgtctagg |
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Protein
| Protein ID | pfu_aug1.0_23715.1_18950.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23715.1_18950.t1 MPNKGTSPYPDMPSIHVSVKGVLTLLKNININKATGPDALPARLLHDYAEHLAPILTSIFQSSLDKGRIPEDWRQASIVP IFKKGDKHLASNYRPVSLTSITCKLLEHIVHSQVMDFLDQQSILHDNQHGFRSKRSCESQLVYTINEIARNLGERGQVDI ILLDFSKAFDKVPHHRFAHKLGYYGIRGSTLQWIRDFLTNRTQQVLLEGHKSSTAPVLSGVPQGTVLGPLLFLLYINDLP ERTTSDARLFADDCLLYTPVKSRSDTETLQKDLDSLVKWEEEWHMAFHPEKWVVIQVTNKRMPTNGNYNIHGHLLDVVDS SKYLGVNISKDLRWDNHINSITSKANRTLGFIRRNMRGCRKQARVAAYQGLVRPTLEYACAAWDPWSSKHIHQLEKVQRR AARFVTRNYHDRHPVAVIIVKNSCQSPYVELKNGETYNGHLVSCDNWMNINLREVICTSR |
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