Gene
| Gene Model ID | pfu_aug1.0_23745.1_11563 |
|---|---|
| Locus | scaffold23745.1 : 1 ... 9315 : + |
| To GenomeBrowser | scaffold23745.1:1..9315 |
| Genes list of scaffold | scaffold23745.1 |
| Synonym | pfu_aug2.0_701.1_04487 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23745.1_11563.t1 | 3 | 1 | ShK | 168 | 200 | 1.8e-09 | 37.7 | 3.0e-08 | 0.00015 | 22.0 |
| pfu_aug1.0_23745.1_11563.t1 | 3 | 2 | ShK | 219 | 251 | 1.8e-09 | 37.7 | 5.9e-09 | 2.9e-05 | 24.3 |
| pfu_aug1.0_23745.1_11563.t1 | 3 | 3 | ShK | 439 | 450 | 1.8e-09 | 37.7 | 0.82 | 4100.0 | -1.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_23745.1_11563.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23745.1_11563.t1 ctcgtttgggcaaaatctaagaagataggatgtgctataaatagatgtcccgagctgactttacccgaggaatacgtacc taacgcctggttcctgtactgtgtgtatgacccgaagagcaaaccacctacaaagccaacaacaaccacaccaaaaccaa caaccaaaaaaccaacaccaaaaccagactttcaaccaaagagggttgtcatagggaaggtcattaccactggaaataaa ttctctatagatgatatacgtaaaaacaaaacatccgtatcgttcaaattcgacgccccaataaaaagtccagttaaaca tacatccggctcatcaggcggatttggaggaaaagcgcttttgaagactggatttggaaattttatgatggatgggaaga gaacacaaaatgcagctatagggcatcagctattccccaaacctactccgttggagaaaaaacaacctcaaactgctgca actggaatgatcaagaaagaagaatgcaaggacaataatgtatactgtgagcactgggtaatttactgcaaatctaatgc ctacgtttttgagaactgtcagaagtcctgtcgaaattgtaacatcccagtccctcccccgcttcccccgcctggtggag caccgaagctgaagaaatgtatggatttgaatgaatattgtcctcactggaagaaattttgctaccggaataaatatgtc acatcacagtgccagaagcaatgtgggacttgtgggcatattgggcaggagaagttggcgacggttaccatgggtacaac ctatgagaatccacgtggaggatacgttcaaaacatgccagttacaacagatcctaatagaatgcgagataatcggtaca ttccaacatccactttcgcgaatgagccgagtaacaataacatgatacctccaagagtaaaatcatttcgccagcaatct ggtaataacgtgcaacagagcaatgattatctggataattttgtacgacgcaccatgagggatatgacaacagaggggag acttgccttcagaggacatactgccgcacccgatactacaacaccctatataccactccagcaaccaactacaacaacga ccttaatgccacctacaacttttccaacacgaaatatccgtcataacggtcataatcacttcccacgtagaagaaatcaa gtacgaacgcagcagaggatgcaccaccatcctcaaccaaatggcaatcctcatcctcatccaaatgaccctcantcctc atccaaacgaccctcaccctcatccttatccaaatggccctcaatcaaatgtcaatcctcattcaaatacaaatcatcgt ccaaatcttaa |
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Protein
| Protein ID | pfu_aug1.0_23745.1_11563.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23745.1_11563.t1 LVWAKSKKIGCAINRCPELTLPEEYVPNAWFLYCVYDPKSKPPTKPTTTTPKPTTKKPTPKPDFQPKRVVIGKVITTGNK FSIDDIRKNKTSVSFKFDAPIKSPVKHTSGSSGGFGGKALLKTGFGNFMMDGKRTQNAAIGHQLFPKPTPLEKKQPQTAA TGMIKKEECKDNNVYCEHWVIYCKSNAYVFENCQKSCRNCNIPVPPPLPPPGGAPKLKKCMDLNEYCPHWKKFCYRNKYV TSQCQKQCGTCGHIGQEKLATVTMGTTYENPRGGYVQNMPVTTDPNRMRDNRYIPTSTFANEPSNNNMIPPRVKSFRQQS GNNVQQSNDYLDNFVRRTMRDMTTEGRLAFRGHTAAPDTTTPYIPLQQPTTTTTLMPPTTFPTRNIRHNGHNHFPRRRNQ VRTQQRMHHHPQPNGNPHPHPNDPXSSSKRPSPSSLSKWPSIKCQSSFKYKSSSKS |
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