Gene
| Gene Model ID | pfu_aug1.0_23828.1_26123 |
|---|---|
| Locus | scaffold23828.1 : 1 ... 4058 : + |
| To GenomeBrowser | scaffold23828.1:1..4058 |
| Genes list of scaffold | scaffold23828.1 |
| Synonym | pfu_aug2.0_125.1_16982 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23828.1_26123.t1 | gi|260831031|ref|XP_002610463.1| | hypothetical protein BRAFLDRAFT_59543 [Branchiostoma floridae] | 2.0e-26 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_23828.1_26123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23828.1_26123.t1 agatcttgtagacataagaaacaatgggtagtccagtcaggaaaagcgatattcttgcttacagaattttatcccgttga ccttcagagtcatgttcaggaagcttacgcaacccattatcaggatgtcttgagcagtgatccttacttttcacccaata cagaaaatgacatttattccaacaaactagagacagcattcaatgttgcactcaaggttcagaatgtgagacaaactctg gaaactgcagtcaaaggtggtgcagtggtcctgagggagccgtctgtgatcaaagatgaaagaggtgccatagaattagc tgtgataaaatcttgtattggaaatgttgtccatactctcatagacgacaaacaatataatggggtattcttgcctctat ttaatgaacattgcagctgcaaaaacattgaatctcagaactttatagtgtcacatatggaccacatagcatttgtttgt agtagaggttcaacatcctccattctgaagtggtacgaaaactgttttaagatgcacagatttttcattaacagatatct gatgcaaaagtttaccaagccattgttcagtaaaaggacatttttcttagaattgatagaaagggtaggagcaagaggct ttggagctgggaatataacagctctctggcgagctgtgcaggcctatatgacacaaggagataaatga |
|
Protein
| Protein ID | pfu_aug1.0_23828.1_26123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23828.1_26123.t1 RSCRHKKQWVVQSGKAIFLLTEFYPVDLQSHVQEAYATHYQDVLSSDPYFSPNTENDIYSNKLETAFNVALKVQNVRQTL ETAVKGGAVVLREPSVIKDERGAIELAVIKSCIGNVVHTLIDDKQYNGVFLPLFNEHCSCKNIESQNFIVSHMDHIAFVC SRGSTSSILKWYENCFKMHRFFINRYLMQKFTKPLFSKRTFFLELIERVGARGFGAGNITALWRAVQAYMTQGDK |
|