Gene
| Gene Model ID | pfu_aug1.0_23842.1_62257 |
|---|---|
| Locus | scaffold23842.1 : 1 ... 8879 : + |
| To GenomeBrowser | scaffold23842.1:1..8879 |
| Genes list of scaffold | scaffold23842.1 |
| Synonym | NA |
Manual annotation
| Study field | other |
|---|---|
| Gene name | myosin-Ic-like |
| Description | NCBI BLASTP hit to XP_002747876.1|PREDICTED: myosin-Ic-like[Callithrix jacchus]. Orthology is supported by NJ tree. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23842.1_62257.t1 | 5 | 1 | Myosin_head | 16 | 75 | 0.0 | 368.3 | 1.4e-21 | 2.0e-17 | 62.5 |
| pfu_aug1.0_23842.1_62257.t1 | 5 | 2 | Myosin_head | 76 | 168 | 0.0 | 368.3 | 2.79993e-41 | 4.2e-37 | 127.5 |
| pfu_aug1.0_23842.1_62257.t1 | 5 | 3 | Myosin_head | 173 | 225 | 0.0 | 368.3 | 6.8e-27 | 1.0e-22 | 80.0 |
| pfu_aug1.0_23842.1_62257.t1 | 5 | 4 | Myosin_head | 226 | 258 | 0.0 | 368.3 | 3.7e-11 | 5.5e-07 | 28.0 |
| pfu_aug1.0_23842.1_62257.t1 | 5 | 5 | Myosin_head | 258 | 332 | 0.0 | 368.3 | 1.1e-27 | 1.6e-23 | 82.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23842.1_62257.t1 | gi|326931334|ref|XP_003211787.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_23842.1_62257.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23842.1_62257.t1 taagcgggatcatataggagtacaggattttgtgctcctggaggactacaccaatcctgctgcctttatagaaaacctca ggaaaagattcacagaaaatcttatctatacttatataggtcctgtactggtgtctgtgaatccttaccacaatatagat atatacaaccaggaaatcatagagacttatagaaatgtcaacttctacgagctgcctcctcatatcaatctcatgtttca ggcatttggtaatgctaaaacaaacagaaatgacaactccagtagatttgggaagtacatggacgttcagtttgattaca agggagctcctgtaggtggccatatattgaattaccttctggagaagtcacgtgtggtacatcatgctgagggtgagcgt aattttcacattttttatcagctgcttagtggcgccaccccactcctcatcagtaaactcaaactgagcaaagatcctga acaatatttctacttgtcacagaggcgcttaaagtgcagtttgatgggtctgttagacatatatggttttgaaatatttg gagttaacagctttgagcagttttgtatcaactactgtaacgaaaagttacagcagctatttatagaactgaccttgaaa tccgagcaagaagagtatcaaagagagggtatagcggagttccgtctgttacattatgctggagatgtgacgtacaaagt gaaaggattcctggacaaaaataacgacttactcttcagagatcttaaggaggcatctacacaattcaagactagcttag cccaacttatggaaatcctaatgtcaaaggagccgtcatacgtgagatgtattaaacccaatgactacaaacgctcagat atgtttgatgagaagatagtgtaccaccaagtgaaatatcttggattaatggagaatttacgagtccgcagggcagggtt tgcctacagaaggccatatgaagtctttttgaaaaggtaa |
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Protein
| Protein ID | pfu_aug1.0_23842.1_62257.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23842.1_62257.t1 KRDHIGVQDFVLLEDYTNPAAFIENLRKRFTENLIYTYIGPVLVSVNPYHNIDIYNQEIIETYRNVNFYELPPHINLMFQ AFGNAKTNRNDNSSRFGKYMDVQFDYKGAPVGGHILNYLLEKSRVVHHAEGERNFHIFYQLLSGATPLLISKLKLSKDPE QYFYLSQRRLKCSLMGLLDIYGFEIFGVNSFEQFCINYCNEKLQQLFIELTLKSEQEEYQREGIAEFRLLHYAGDVTYKV KGFLDKNNDLLFRDLKEASTQFKTSLAQLMEILMSKEPSYVRCIKPNDYKRSDMFDEKIVYHQVKYLGLMENLRVRRAGF AYRRPYEVFLKR |
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