Gene
| Gene Model ID | pfu_aug1.0_23844.1_54930 |
|---|---|
| Locus | scaffold23844.1 : 2136 ... 5797 : + |
| To GenomeBrowser | scaffold23844.1:2136..5797 |
| Genes list of scaffold | scaffold23844.1 |
| Synonym | pfu_aug2.0_240.1_00487 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23844.1_54930.t1 | gi|260825792|ref|XP_002607850.1| | hypothetical protein BRAFLDRAFT_117283 [Branchiostoma floridae] | 6.0e-11 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 2 |
Transcript
| Transcript ID | pfu_aug1.0_23844.1_54930.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23844.1_54930.t1 atggctaccaactattccttaacaacacatcaattgtcaaacctagcagttgaggctggctttgacttcgtagagcagaa ggggtcatcaatttacacgtgcgtcaaagccacgagcggtaccacgtcacatctgatgcaatatccaaaaataaacttac atggagtagaccctcctacagataagattatggagtacttgatatcgccgtacgcagactatgctttgtcctacccactc ctggtagacggtaaaaacgaagatatacagctatctgattgttacaaaattaaagattttaaagctcgtaacttccgtta cctccgtcttgacactaaactgattgaatgcctcgatctggccagtgattattatgagagttgtattgagatcatacctg attctggataccgaccccattcactgaacaacaaaaacatagatgatagacacgaggaagaaaaatggcgatttaacgtg ggcatggcagtagaagttcggccaaggaggaacaacgcagaacaattagagcaaatggctttgacaataatgagaagttg tctaccagaccttagactgaagcgactgaaactgggcatgggtacacacagtgacagagtttatgtagatatacgtacat cttcatccaatgattccacagatatcctccagttatggaatgttgataatgataaactcatggactctgtagatgagact tataaacaactgatgaaagggggtccattcattcagcctacaaacaaggagagggcttgtaaggaacctgctttaggaaa agacaactattacataaaggatccaaccaaagggatttgcttctttgacttctctggtagtttctgtcgggacacagagc aacaccgaaaagacaaggcagaagagcttgctgaaaaattggcagaagctgcgggatcaaatcagttcccaaaatctgag gcaaggaagaaaactacagcctgtctggtagaaacatgtggtggatgtgtcggaaaaggtcagtgtcaaaacattttaat ggtgtacaataagaatgtgggatttgttaatttctatctcaccaaagatgtgaaagaggatagaatcgtcggctccattc agaggaaaatagagagatgggcccaatcttcatgccctcaaaggacgcggatccttgtggcaccttatgatgtacatatc atatccgagtcacggagaaaacgcagcattgaacgtagtgtcgaacgcaatcaacgaatccacaatatgcgcaactggga aatagattggttgatgacaatgacataa |
|
Protein
| Protein ID | pfu_aug1.0_23844.1_54930.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23844.1_54930.t1 MATNYSLTTHQLSNLAVEAGFDFVEQKGSSIYTCVKATSGTTSHLMQYPKINLHGVDPPTDKIMEYLISPYADYALSYPL LVDGKNEDIQLSDCYKIKDFKARNFRYLRLDTKLIECLDLASDYYESCIEIIPDSGYRPHSLNNKNIDDRHEEEKWRFNV GMAVEVRPRRNNAEQLEQMALTIMRSCLPDLRLKRLKLGMGTHSDRVYVDIRTSSSNDSTDILQLWNVDNDKLMDSVDET YKQLMKGGPFIQPTNKERACKEPALGKDNYYIKDPTKGICFFDFSGSFCRDTEQHRKDKAEELAEKLAEAAGSNQFPKSE ARKKTTACLVETCGGCVGKGQCQNILMVYNKNVGFVNFYLTKDVKEDRIVGSIQRKIERWAQSSCPQRTRILVAPYDVHI ISESRRKRSIERSVERNQRIHNMRNWEIDWLMTMT |
|