Gene
| Gene Model ID | pfu_aug1.0_23872.1_47611 |
|---|---|
| Locus | scaffold23872.1 : 11566 ... 13196 : + |
| To GenomeBrowser | scaffold23872.1:11566..13196 |
| Genes list of scaffold | scaffold23872.1 |
| Synonym | pfu_aug2.0_814.1_14581 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23872.1_47611.t1 | 1 | 1 | 7tm_1 | 9 | 290 | 1.1e-22 | 80.4 | 6.8e-26 | 1.4e-22 | 80.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_23872.1_47611.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23872.1_47611.t1 atgagattccggtatactttcatgtccgcagagttttgtaagtttatccgcttcgtgacttattcctcgtccggggcatc tggaatgttactaggagttattgcgtttgaaagattcagaaaaatctgtcgtccattaaaatggcagatgagcagacgtg tggtcatccgggtgtgtgttggcgtcattatcctagcgcttttcatctgctctcctactctggacttctatggaatagct aaaacggaagttgtgggctatccagggatatacggtgatatttgtggtcctgtaaagtctgattataacacagtattctt cggaattctcttgttaattggcacggtggtggtaatcatggctaccgtattttatattctaataatcaaagtggtgtgcc gccagcagcactatatggcagacaggactagcgcagcgtccaataggacaacggtcacttcagagataagaagctcaaac ttgcttgagaatgggaaggaacaattgcagctccctacaaacaatgttcaagcggataaggactccgataataactacac gacagaaactacaacttctgataacgaaccaagctttgcactggataaccaaaaaagtcgatcggtttctactgtaacgc ggaggaaaaggaagaaggcgaacagcatgaaaagggctattcgaagcgcatttatgtttttagtgacctccattgtgtct tactgtggattcttaccggtgcttattatgagcataatccgagccataaattccagcctatacgatgacattgagagcaa cacggggtcgttgatggacctcctaacaagggcctactttttcaatagtattgcaaatcccgttgtttattgttttatgg acgaaaaatttagaaatgcctgtaaagcaaaatacaaagtcattttctgtagatgctgcaagtga |
|
Protein
| Protein ID | pfu_aug1.0_23872.1_47611.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23872.1_47611.t1 MRFRYTFMSAEFCKFIRFVTYSSSGASGMLLGVIAFERFRKICRPLKWQMSRRVVIRVCVGVIILALFICSPTLDFYGIA KTEVVGYPGIYGDICGPVKSDYNTVFFGILLLIGTVVVIMATVFYILIIKVVCRQQHYMADRTSAASNRTTVTSEIRSSN LLENGKEQLQLPTNNVQADKDSDNNYTTETTTSDNEPSFALDNQKSRSVSTVTRRKRKKANSMKRAIRSAFMFLVTSIVS YCGFLPVLIMSIIRAINSSLYDDIESNTGSLMDLLTRAYFFNSIANPVVYCFMDEKFRNACKAKYKVIFCRCCK |
|