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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_23939.1_62265
Locus scaffold23939.1 : 1249 ... 11492 : +
To GenomeBrowser scaffold23939.1:1249..11492
Genes list of scaffold scaffold23939.1
Synonym pfu_aug2.0_325.1_17298

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_23939.1_62265.t1 1 1 Alpha_kinase 1 183 0.0 185.6 0.0 0.0 185.3

Transcript
Transcript IDpfu_aug1.0_23939.1_62265.t1
Definition-
>pfu_aug1.0_23939.1_62265.t1
atgcgacaatgtttccggctaagtgattttgttgcatatatcaggaagaagctgtcaacattctcccgatcagctgattg
gaaccatgcatgtaattatgtggccaagaagtacatagagaatgtggacagagacgtgtatttccaggatgtaaagttac
aaatggacgccaaagtatggggggaggagtacaatagacataatcctcctaaaaaggtagacatatttcagatgtacatt
ttggagtttaaggacagaccagggcagcctctgtaccatctagaacactatatagagggggactatgtcaaatacaactc
caattcaggatttgtagacgagaatctcagatatacacctcaggcattcagccactttacatttgagagatctggtcacc
agctgatcatcgtagatgtacaaggggttggtgacctatatactgacccacagatccacaccatcgacggtaaagagtac
ggtgatggtaacctgggggctaagggaatggcgctgttcttccattctcacatctgtaatgatatctgtgcagcactgga
cttgacagagtttgatctcgcaccaaaagaaatagctacacaaaaacagtttcttagaagccagaggaaatccctaatga
agacacgactacgtggagatgaggaacattgtctgtctctgtcaccaactacagaaaaaatagacatcacacgtttcttg
gatcgtcagaggtcgacgtcctccgtgattagtgacatcacccctgatagcaccacggatgaggaaatgttgtctgttga
cagcccattgggcttctttaggcccggtagaatcagactggatagtggctctgaatcatctctcacagcagaggcttgca
gagttgtggatgtagcagatcttatgcacgaggatgagattcccccgtcttggtctcagtgccgtgattga

Protein
Protein IDpfu_aug1.0_23939.1_62265.t1
Definition-
>pfu_aug1.0_23939.1_62265.t1
MRQCFRLSDFVAYIRKKLSTFSRSADWNHACNYVAKKYIENVDRDVYFQDVKLQMDAKVWGEEYNRHNPPKKVDIFQMYI
LEFKDRPGQPLYHLEHYIEGDYVKYNSNSGFVDENLRYTPQAFSHFTFERSGHQLIIVDVQGVGDLYTDPQIHTIDGKEY
GDGNLGAKGMALFFHSHICNDICAALDLTEFDLAPKEIATQKQFLRSQRKSLMKTRLRGDEEHCLSLSPTTEKIDITRFL
DRQRSTSSVISDITPDSTTDEEMLSVDSPLGFFRPGRIRLDSGSESSLTAEACRVVDVADLMHEDEIPPSWSQCRD

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