Gene
| Gene Model ID | pfu_aug1.0_23964.1_18968 |
|---|---|
| Locus | scaffold23964.1 : 1727 ... 18532 : - |
| To GenomeBrowser | scaffold23964.1:1727..18532 |
| Genes list of scaffold | scaffold23964.1 |
| Synonym | pfu_aug2.0_3171.1_05774 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_23964.1_18968.t1 | 1 | 1 | TSP_1 | 91 | 139 | 6.3e-09 | 35.8 | 1.3e-12 | 6.3e-09 | 35.8 |
| pfu_aug1.0_23964.1_18968.t1 | 5 | 1 | EGF_2 | 139 | 168 | 8.5e-10 | 38.6 | 2.8e-05 | 0.14 | 12.3 |
| pfu_aug1.0_23964.1_18968.t1 | 5 | 1 | hEGF | 157 | 168 | 1.0e-09 | 37.8 | 2.7e-06 | 0.014 | 15.4 |
| pfu_aug1.0_23964.1_18968.t1 | 5 | 2 | EGF_2 | 173 | 200 | 8.5e-10 | 38.6 | 2.0e-06 | 0.0099 | 16.0 |
| pfu_aug1.0_23964.1_18968.t1 | 5 | 2 | hEGF | 188 | 200 | 1.0e-09 | 37.8 | 1.2e-05 | 0.059 | 13.4 |
| pfu_aug1.0_23964.1_18968.t1 | 5 | 3 | EGF_2 | 205 | 232 | 8.5e-10 | 38.6 | 5.5e-06 | 0.027 | 14.6 |
| pfu_aug1.0_23964.1_18968.t1 | 5 | 3 | hEGF | 220 | 227 | 1.0e-09 | 37.8 | 0.00058 | 2.9 | 8.1 |
| pfu_aug1.0_23964.1_18968.t1 | 5 | 4 | EGF_2 | 236 | 263 | 8.5e-10 | 38.6 | 1.2e-05 | 0.061 | 13.5 |
| pfu_aug1.0_23964.1_18968.t1 | 5 | 4 | hEGF | 251 | 261 | 1.0e-09 | 37.8 | 0.00034 | 1.7 | 8.9 |
| pfu_aug1.0_23964.1_18968.t1 | 5 | 5 | EGF_2 | 268 | 294 | 8.5e-10 | 38.6 | 3.8e-06 | 0.019 | 15.1 |
| pfu_aug1.0_23964.1_18968.t1 | 5 | 5 | hEGF | 283 | 294 | 1.0e-09 | 37.8 | 1.3e-05 | 0.062 | 13.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_23964.1_18968.t1 | gi|115760413|ref|XP_795832.2| | 3.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_23964.1_18968.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23964.1_18968.t1 acaattctgaagttgacttacttcggacttcgcactctggacttggaaattttcggttcatattgaagaaatcagtcatt tgtgtacgacgtttctgtgattttgtgttccttttaccttttgtgtctctttctgagcatgcaataaaagacgatggacg cgttgtgccaaattatggacaaaaagtgtcgtctgcaccggaaaagggggatatcaaacttgttacggactcaaaagtta tccagaaaacgtcaccaactccaccattagtacaatggtcgtcatggtcaccttgcagtgccacctgtggaaaagggaca caatcgcgatctctttactgcaataacaataaagttgaaaagtgttccgtaaatacagatttgggttcgcagtctaggct ctgttacctaacagaatgtaaagatgacatgtgtaaaaatggcggccagtattccatgttatatcaaaggtgtcagtgta cctcaggttttacggggaagtattgtgaaaaatatcattgtgaccctatatgtttgaatggaggtaattgtacaggtccg aacgtatgtacctgccctacaggctactcaggaaaatcatgtaatacagctatttgcagacctaagtgtaggaatggtgg tctctgtgccaggcctgacgtctgtacctgtcctcagggatatctacctccgtattgtaaacataagtgcaagcgaacgt gcaaaaatggtggattctgtatcggtccaaataaatgtgcatgtaaacctggttaccacggaaagtggtgccatctaggg cattgcaaacagtcatgtctgaacggtggtaaatgcaggaacaatagatgtagatgtcgaaatgggttcaaaggaaaacg gtgccaacaaagatcttgccgttatgaaaaatatgttcagccatacgatcgctcataccggaaactgataagagaagact atgtcacaaaatgtggaccttggacgtggaaaacatgtgtgaaaacaagggttcgttatgaattagtgtcaaagactatg tacaggacagcatacagatgtgtctaa |
|
Protein
| Protein ID | pfu_aug1.0_23964.1_18968.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_23964.1_18968.t1 NSEVDLLRTSHSGLGNFRFILKKSVICVRRFCDFVFLLPFVSLSEHAIKDDGRVVPNYGQKVSSAPEKGDIKLVTDSKVI QKTSPTPPLVQWSSWSPCSATCGKGTQSRSLYCNNNKVEKCSVNTDLGSQSRLCYLTECKDDMCKNGGQYSMLYQRCQCT SGFTGKYCEKYHCDPICLNGGNCTGPNVCTCPTGYSGKSCNTAICRPKCRNGGLCARPDVCTCPQGYLPPYCKHKCKRTC KNGGFCIGPNKCACKPGYHGKWCHLGHCKQSCLNGGKCRNNRCRCRNGFKGKRCQQRSCRYEKYVQPYDRSYRKLIREDY VTKCGPWTWKTCVKTRVRYELVSKTMYRTAYRCV |
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