Gene
| Gene Model ID | pfu_aug1.0_24.1_50552 |
|---|---|
| Locus | scaffold24.1 : 17436 ... 37731 : + |
| To GenomeBrowser | scaffold24.1:17436..37731 |
| Genes list of scaffold | scaffold24.1 |
| Synonym | pfu_aug2.0_15.1_16717 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24.1_50552.t1 | 2 | 1 | FH2 | 78 | 116 | 0.0 | 157.7 | 0.12 | 1800.0 | -2.5 |
| pfu_aug1.0_24.1_50552.t1 | 2 | 2 | FH2 | 373 | 690 | 0.0 | 157.7 | 0.0 | 0.0 | 157.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24.1_50552.t1 | gi|291243578|ref|XP_002741679.1| | PREDICTED: formin-F-like [Saccoglossus kowalevskii] | 1.00053e-42 |
Transcript
| Transcript ID | pfu_aug1.0_24.1_50552.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24.1_50552.t1 atgccgaatgtaggtcagagggacatgcagccatcctcggacttattcacccttccacggcgatgtagtgacccagattt taattcaggaactggtattacaccagcggtatataatttgaaattagtcttttcttacgatttatcacatacgcagttac acagtgtatctattcgttacatttgcctttgtttccatagaaatgtagagcgaggaaccatatttcgcagagaggaacct gaaagtaaccaacgtctaagtcagattgtgcagagaacagagttactagagaacgttacaaagcaccgcccaaaaaagat gtccagtaaaggcagccgaaaactatccgagcagcaatcgacagatgactttaaccaacatgaccaattggaagaacaat cagaggaatccagtgatacgagctcgaagagatcgcaacgttcgacgaactctagtggaaaatcagttgtgtctattgac aacgaattcccggaaacaattgacacaagcaatcagagcgattctgtaagaaacatttcatcaccaccacttacgtcatc agaatgtgatcagtgtcatactgcaacccagattttgaaggacaacgttcataaggagtggctatctcccgaagacgaac cggacaaatatgaagatgatgtaatttatgaaaacattcaggcctgtagagctcagaaagaaggtgtccaactgcctgat ccgaaagttgacaatacaaagaacggtgcgagtatcaatgatggaagtgaaaatcatatagcagacgacagtgtacggga aacacaatcagagtcgggcaagaaaaatgatataagaatttcacagattagacagaatgacacagaaaaagaacatatgg aaacaggaaacaaagataataaaggccaagtcagagtttctataaatcaaaacaaagagattgaagatgatcacaagtgt agcacttttgaacaaattcgggaaaagtttaacgtcactaatactgaacaaggaatgaaactgcctaaccaacaggagca aaacgaaattacaaatgttccggaagcgcctccaccccctccctctttaccccctccaccacctccgatccatcaacaag gagagagaaagtacaggacacttcattggacaccggttcacaagagtcagataaaagggtcagtttggaaaaatacaaag gacgtaaccacgacgttagacgagaatcttcttcaagaaaacttcagcattcagaaacacaatgccatgaaatttacagg agatcaagacggtttgttcgacgagaaaaaagttttactggattctcgtcgagctaggaatcttgccatcattctcaatg gtctgaaatctgacaaggcgtgcagcatttacgacatcctcaactcagtgaaagaggacgattcgtttccggcagagaaa cttacaaccatcagacgataccagccaacttctgacgatatagaggtttacaagttatacgcggatagaaaggaaatgtt ggatcccgttgatcagtttatgtacgaactttgcgaaattcagtgtcttagccttagacttgactttgttctactccttt gggatttcccgagacaactgaaatgttcaacacaggcagtagagaagatcatggcagcctgtgaccaactgatgtccagt cagcagctagtaggtgttctaagctacattcttgccataggaaattacttatcgtcgaagaacaacgatgaaaaaggatg tgtaggattcaaattgtcgtccctaggaaagtttatagagatgcgaggcagatctgcagactgtacattcctacacgttt tggccgaacaggtgaaggtggatagtgatttacagggatggacggataagctgtcgtgtgtccatgattgtgagggattg tcagtccccgctgtgtctactgaaattgaagtgttacggtgcgatttgacaaccttgaagaaaaatttgaaagttttgaa aggcaaactaaagaaaccaacggacaaagagaaggaatttttcaatacagcccagcaaatgacgtcaaacgcactaaatg atgacgtcacaatagccgatcagaatacaagtacacgtacaagttacacgtag |
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Protein
| Protein ID | pfu_aug1.0_24.1_50552.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24.1_50552.t1 MPNVGQRDMQPSSDLFTLPRRCSDPDFNSGTGITPAVYNLKLVFSYDLSHTQLHSVSIRYICLCFHRNVERGTIFRREEP ESNQRLSQIVQRTELLENVTKHRPKKMSSKGSRKLSEQQSTDDFNQHDQLEEQSEESSDTSSKRSQRSTNSSGKSVVSID NEFPETIDTSNQSDSVRNISSPPLTSSECDQCHTATQILKDNVHKEWLSPEDEPDKYEDDVIYENIQACRAQKEGVQLPD PKVDNTKNGASINDGSENHIADDSVRETQSESGKKNDIRISQIRQNDTEKEHMETGNKDNKGQVRVSINQNKEIEDDHKC STFEQIREKFNVTNTEQGMKLPNQQEQNEITNVPEAPPPPPSLPPPPPPIHQQGERKYRTLHWTPVHKSQIKGSVWKNTK DVTTTLDENLLQENFSIQKHNAMKFTGDQDGLFDEKKVLLDSRRARNLAIILNGLKSDKACSIYDILNSVKEDDSFPAEK LTTIRRYQPTSDDIEVYKLYADRKEMLDPVDQFMYELCEIQCLSLRLDFVLLLWDFPRQLKCSTQAVEKIMAACDQLMSS QQLVGVLSYILAIGNYLSSKNNDEKGCVGFKLSSLGKFIEMRGRSADCTFLHVLAEQVKVDSDLQGWTDKLSCVHDCEGL SVPAVSTEIEVLRCDLTTLKKNLKVLKGKLKKPTDKEKEFFNTAQQMTSNALNDDVTIADQNTSTRTSYT |
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