Gene
| Gene Model ID | pfu_aug1.0_2400.1_44373 |
|---|---|
| Locus | scaffold2400.1 : 29656 ... 42250 : + |
| To GenomeBrowser | scaffold2400.1:29656..42250 |
| Genes list of scaffold | scaffold2400.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2400.1_44373.t1 | 3 | 1 | Ank_2 | 65 | 124 | 2.2e-37 | 127.2 | 2.6e-10 | 7.7e-07 | 29.3 |
| pfu_aug1.0_2400.1_44373.t1 | 3 | 1 | Ank_4 | 69 | 116 | 6.8e-26 | 90.1 | 1.6e-07 | 0.00049 | 20.5 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 1 | Ank_5 | 80 | 124 | 5.8e-29 | 99.4 | 3.4e-10 | 1.0e-06 | 28.7 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 1 | Ank | 96 | 124 | 2.09999e-41 | 137.7 | 9.1e-10 | 2.7e-06 | 26.8 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 1 | Ank_3 | 96 | 124 | 4.3e-28 | 94.5 | 1.2e-08 | 3.6e-05 | 23.5 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 2 | Ank | 131 | 160 | 2.09999e-41 | 137.7 | 3.7e-09 | 1.1e-05 | 24.9 |
| pfu_aug1.0_2400.1_44373.t1 | 3 | 2 | Ank_2 | 131 | 184 | 2.2e-37 | 127.2 | 1.6e-14 | 4.8e-11 | 42.8 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 2 | Ank_5 | 132 | 160 | 5.8e-29 | 99.4 | 3.8e-07 | 0.0011 | 19.1 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 2 | Ank_3 | 132 | 156 | 4.3e-28 | 94.5 | 4.4e-05 | 0.13 | 12.5 |
| pfu_aug1.0_2400.1_44373.t1 | 3 | 2 | Ank_4 | 132 | 183 | 6.8e-26 | 90.1 | 9.9e-12 | 2.9e-08 | 33.9 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 3 | Ank_5 | 154 | 183 | 5.8e-29 | 99.4 | 8.0e-07 | 0.0024 | 18.0 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 3 | Ank | 165 | 184 | 2.09999e-41 | 137.7 | 1.2e-09 | 3.6e-06 | 26.5 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 3 | Ank_3 | 165 | 184 | 4.3e-28 | 94.5 | 9.6e-06 | 0.028 | 14.6 |
| pfu_aug1.0_2400.1_44373.t1 | 3 | 3 | Ank_2 | 235 | 320 | 2.2e-37 | 127.2 | 3.5e-19 | 1.0e-15 | 57.8 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 4 | Ank_5 | 251 | 289 | 5.8e-29 | 99.4 | 8.9e-06 | 0.026 | 14.7 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 4 | Ank | 257 | 288 | 2.09999e-41 | 137.7 | 3.2e-10 | 9.4e-07 | 28.3 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 4 | Ank_3 | 257 | 284 | 4.3e-28 | 94.5 | 7.8e-08 | 0.00023 | 21.0 |
| pfu_aug1.0_2400.1_44373.t1 | 3 | 3 | Ank_4 | 258 | 311 | 6.8e-26 | 90.1 | 1.9e-11 | 5.6e-08 | 33.0 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 5 | Ank_5 | 277 | 321 | 5.8e-29 | 99.4 | 1.5e-09 | 4.4e-06 | 26.7 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 5 | Ank | 292 | 322 | 2.09999e-41 | 137.7 | 1.3e-11 | 3.9e-08 | 32.6 |
| pfu_aug1.0_2400.1_44373.t1 | 5 | 5 | Ank_3 | 292 | 318 | 4.3e-28 | 94.5 | 1.1e-07 | 0.00034 | 20.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2400.1_44373.t1 | gi|340382873|ref|XP_003389942.1| | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_2400.1_44373.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2400.1_44373.t1 atgagtatcattcaaattccaactgttagaataggcgacgaaagacagaacaaagtccatgctgccattaacagaagaag gagtagcagatttgtaaatgtgtccggtatatcaacattgtacccctcctataagaacagcatcagggagggggacaaag acttggaagaagaaactgacatatcaagtataacagtcatacaggctgctagagagggtttggcgaaggaacttgatctg ctgttgaccgaatacccaagtcaggttaacacgacggataattctggtttgacttccctccatgttgcatgcaagagtaa ttctgccaagatcgcggaagttctgatacgacacaaagcagatttgaacatggagataaaaccctatcatataagtcctc ttcacgtcactgccaaacacaacgcttctgatgtgtgccgcctacttctaaatagtggcgcaaatgtcacgtcacgtgac tgcaagaaaaagactccgctacattatgctgctcggagaggtcacacagatattgcaacagatcttcttcaactcattac taccaatatgttcggttatattcgcggcgtttcatattcgcgaatcgaaggacctcatgaatatcgtgataataaaacgc atgcaaatgaaatacggtttacagtatttgttaatatggggaagcctatctgggaatgatttggacaggaagacgtaatt gatattttgatgcatgcaagtcaatcagaattgcacgatgaagattcggacggtcgatcgccgttgatggttgctgctgt acaaggtcattactttgctgttcataccttactcagacacggagctgatgtttctagcagggacgaaaattcgtgtactg ccttaatgcttgccgccaaagaaggtcatgcaaaagtcataagcttactactacaaaattatgccgatattgatgtcgca gacaaactgaagcacaaaatcgataactcagaaaatcataaaccgaagcagaggttgggacttaagcgtcatatttgtaa gcagctcagatttgtaatggatttcatctttactcatatgcacgacattgataaaattcaattctatccaatgaaagaaa agagaatgtttatatccgacgttttcaccaagttaataccatttctaaagataaaaaaattcaaaccaatgccttttagt tttgaaaatctaattttccttttagaataccgccttacatattgcgtcatacaatggccagatggattctttggatgtac tgttaaagaaaggcgcaaatgtaaacataaagaatag |
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Protein
| Protein ID | pfu_aug1.0_2400.1_44373.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2400.1_44373.t1 MSIIQIPTVRIGDERQNKVHAAINRRRSSRFVNVSGISTLYPSYKNSIREGDKDLEEETDISSITVIQAAREGLAKELDL LLTEYPSQVNTTDNSGLTSLHVACKSNSAKIAEVLIRHKADLNMEIKPYHISPLHVTAKHNASDVCRLLLNSGANVTSRD CKKKTPLHYAARRGHTDIATDLLQLITTNMFGYIRGVSYSRIEGPHEYRDNKTHANEIRFTVFVNMGKPIWEXFGQEDVI DILMHASQSELHDEDSDGRSPLMVAAVQGHYFAVHTLLRHGADVSSRDENSCTALMLAAKEGHAKVISLLLQNYADIDVA DKLKHKIDNSENHKPKQRLGLKRHICKQLRFVMDFIFTHMHDIDKIQFYPMKEKRMFISDVFTKLIPFLKIKKFKPMPFS FENLIFLLEYRLTYCVIQWPDGFFGCTVKERRKCKHKE |
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