Gene
| Gene Model ID | pfu_aug1.0_2401.1_01096 |
|---|---|
| Locus | scaffold2401.1 : 59446 ... 79955 : - |
| To GenomeBrowser | scaffold2401.1:59446..79955 |
| Genes list of scaffold | scaffold2401.1 |
| Synonym | pfu_aug2.0_1080.1_01367 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2401.1_01096.t1 | 2 | 1 | Lectin_C | 116 | 219 | 3.3e-16 | 59.8 | 1.8e-15 | 9.1e-12 | 45.5 |
| pfu_aug1.0_2401.1_01096.t1 | 2 | 2 | Lectin_C | 265 | 358 | 3.3e-16 | 59.8 | 1.0e-08 | 5.1e-05 | 23.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 28 |
| egg-4cell | 4 |
| 8-16cell | 3 |
| egg-Dshape | 5 |
| trochophore | 2 |
| >Adult tissues | |
| Dshape | 3 |
| maleGonad | 2 |
| mantle | 10 |
Transcript
| Transcript ID | pfu_aug1.0_2401.1_01096.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2401.1_01096.t1 atgcaaattagatgtgttcgcatccgttcttctttagagaaaactagtcttttgtgtttgatgtttctatgtggtgtgct ggtgtccgttgtcctgtgttttgccgttaaaaatttaaactttatttattctacaatgtttaacaaacaagttacacaac ttatattaatgtctcacgttggctcagatgttggcgtgagggggtccaaggagcaggaggaaaccggagtacccggagaa aaacctcctgcagaggcctggttgggggaccacctatcctcccacataagatccttcgccgaatctggaattcgaacccg ggaccttagagatatgaatcttatctatgaacaagctttaacgagatgcaaagacctgaattcagtgctttttatgccgc aatcttcagagcaaattcaagatatttcagatatatgggacgagaagatatggataggccttcaaggtgatagtaactcg gcatcccttgacgactttagatggagagatgggacgtctctaaatttcacgaattggaaagctggtcattcttttgactc atcttctatgtgtgtctggatggaaaaaaagaattatgataaccaatggagaacagcttcttgtggtgcgaccaccaaaa aagtattgtgttataaacttgacattgtagacagttgtccgaacaactggaagaggacaccgaccagagatgtatgctac ggtaaaatcagcaatggggcgcacacacaatctttaactctttgtccgctgttaggaactattcaggccgaaactataat gcctaaatcggaagaggacaatttctttttagaaagtatgatgtttaacgatacgattgacaatacttacataggattaa gaatggaaactcagcattatcatgacttttactgggatgatgatgacaaacttactttcactaactggattgcgtcccat cctttggactggacaagtggtggatatgacccatgtgtatacgtaacaaagagtaacaactacaaatggtttgatagcag tatatgtgggaaccactttacgacaatgtgtcaatgctggttaaacgtgctaggtgaacccctaagtcagtctaaacagt actgtttcggcgcgactacgttggaaacaaccgacagtaacgatcttgaaactacaacatatttatcttcaaacactccg actgtggaggactcttcaactccatcgttattgacgaccactcatggaatcatatcaacaacaaagacatcttcttgcaa taaaccatgtcagtgcgtcaaaaacaacactatttcagaaactgaattagccacaaagctaaatggcataaggaacaatc taactcttgataaagccaatttgtcatcgacctaccggaaactaaacagtgcagaagatgagaggacgagcagtagaatt atgggatatatgggtgcggctgtggtggcatccgtgggtatccttctgattgtttttgatttaacatcggtggcaaaggg cacaacagaatatacaattcaccattga |
|
Protein
| Protein ID | pfu_aug1.0_2401.1_01096.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2401.1_01096.t1 MQIRCVRIRSSLEKTSLLCLMFLCGVLVSVVLCFAVKNLNFIYSTMFNKQVTQLILMSHVGSDVGVRGSKEQEETGVPGE KPPAEAWLGDHLSSHIRSFAESGIRTRDLRDMNLIYEQALTRCKDLNSVLFMPQSSEQIQDISDIWDEKIWIGLQGDSNS ASLDDFRWRDGTSLNFTNWKAGHSFDSSSMCVWMEKKNYDNQWRTASCGATTKKVLCYKLDIVDSCPNNWKRTPTRDVCY GKISNGAHTQSLTLCPLLGTIQAETIMPKSEEDNFFLESMMFNDTIDNTYIGLRMETQHYHDFYWDDDDKLTFTNWIASH PLDWTSGGYDPCVYVTKSNNYKWFDSSICGNHFTTMCQCWLNVLGEPLSQSKQYCFGATTLETTDSNDLETTTYLSSNTP TVEDSSTPSLLTTTHGIISTTKTSSCNKPCQCVKNNTISETELATKLNGIRNNLTLDKANLSSTYRKLNSAEDERTSSRI MGYMGAAVVASVGILLIVFDLTSVAKGTTEYTIHH |
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