Gene
Gene Model ID | pfu_aug1.0_2402.1_66310 |
---|---|
Locus | scaffold2402.1 : 39345 ... 47955 : - |
To GenomeBrowser | scaffold2402.1:39345..47955 |
Genes list of scaffold | scaffold2402.1 |
Synonym | pfu_aug2.0_7288.1_29567 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2402.1_66310.t1 | 2 | 1 | HYR | 190 | 204 | 1.3e-12 | 47.4 | 0.076 | 560.0 | 0.6 |
pfu_aug1.0_2402.1_66310.t1 | 2 | 2 | HYR | 206 | 282 | 1.3e-12 | 47.4 | 2.1e-15 | 1.6e-11 | 44.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues | |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_2402.1_66310.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2402.1_66310.t1 atgcttcgatttttctttgcagatttaccaagttgtgatggtctaccgtacaactcaaatccgagtctttatgagtatat aggttgtaggactaactctgactgcacgtcagcagaggtctgctgttctaggaatgggacctccaaatgtcacaccacag tccgattctacttccagaattgcctctacaacggcaaatattacgatgtcggtgccgtctttgtcggtaataacggagtt tattgccgttgtggtcaaggtatactgcatggagaaataatatgtagtgccaccgtgaagactaaacatgctgatatatg taaggcacctgatgacagtcaccaaccaaatactacacaagaacctttcatcgggaactgtcccaatgctgatcagttgg tgatagtacgaattcaggaggataagaacatagggtacctcacacatcaatttcatgtaaccgactggcacggcagggtt ttgacgtacttagtcagtcaggaaatttaccatatatgtaactgcacgcatcaacctctctatgaaaacatggccatatc agagcctgatgaatatggtaatgaaggtttttgctgttttaaagttattgtagaagatatatatcctccagtttttcgta cttgtccggagaataggatggtcagcagtggtcagtctgtttcttggatacagccacacgtttgggacaatgtaggggtc aagaatttgaccatgacacccaaaataaaaagtggtgcagtgtggcgtccagggatatacatggtggaatacgcagccgt ggactggtccggcaacagggcgtattgtcagtttagtgtcacagtattaggaggtcattcagatgtaaccgactccccag aacgatcatcatatcccatattgaccatcacctcctctataatcagcattatggcaatagcagtgttggttgttggagca cttacaattagaaaatgtcgccaaggaagtcgtctgcaagcaaacaacagttttctcagcagactccgagctgaaagaat tcgacatggacatagtttcggatctggcgggaatgacaacgcggtatttaccgtttacgactctgagccaccaccgtatg atattgccgtcagagataaactaccggactatatttcctcagattctcctccgccatatgaaagcacatctagcgatgaa cagaccggaagttcaacaatatctggtgccgcatccaatgcgactgtttgtgataattctcaaagtcgatatacattacg aaatgatggtgcatctcagaccgaaaacgctcaaaattcaaacagaagttcgattgtaaacattgttaatccagattcta tccatactgttgtgtga |
Protein
Protein ID | pfu_aug1.0_2402.1_66310.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2402.1_66310.t1 MLRFFFADLPSCDGLPYNSNPSLYEYIGCRTNSDCTSAEVCCSRNGTSKCHTTVRFYFQNCLYNGKYYDVGAVFVGNNGV YCRCGQGILHGEIICSATVKTKHADICKAPDDSHQPNTTQEPFIGNCPNADQLVIVRIQEDKNIGYLTHQFHVTDWHGRV LTYLVSQEIYHICNCTHQPLYENMAISEPDEYGNEGFCCFKVIVEDIYPPVFRTCPENRMVSSGQSVSWIQPHVWDNVGV KNLTMTPKIKSGAVWRPGIYMVEYAAVDWSGNRAYCQFSVTVLGGHSDVTDSPERSSYPILTITSSIISIMAIAVLVVGA LTIRKCRQGSRLQANNSFLSRLRAERIRHGHSFGSGGNDNAVFTVYDSEPPPYDIAVRDKLPDYISSDSPPPYESTSSDE QTGSSTISGAASNATVCDNSQSRYTLRNDGASQTENAQNSNRSSIVNIVNPDSIHTVV |