Gene
| Gene Model ID | pfu_aug1.0_2402.1_66310 |
|---|---|
| Locus | scaffold2402.1 : 39345 ... 47955 : - |
| To GenomeBrowser | scaffold2402.1:39345..47955 |
| Genes list of scaffold | scaffold2402.1 |
| Synonym | pfu_aug2.0_7288.1_29567 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2402.1_66310.t1 | 2 | 1 | HYR | 190 | 204 | 1.3e-12 | 47.4 | 0.076 | 560.0 | 0.6 |
| pfu_aug1.0_2402.1_66310.t1 | 2 | 2 | HYR | 206 | 282 | 1.3e-12 | 47.4 | 2.1e-15 | 1.6e-11 | 44.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2402.1_66310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2402.1_66310.t1 atgcttcgatttttctttgcagatttaccaagttgtgatggtctaccgtacaactcaaatccgagtctttatgagtatat aggttgtaggactaactctgactgcacgtcagcagaggtctgctgttctaggaatgggacctccaaatgtcacaccacag tccgattctacttccagaattgcctctacaacggcaaatattacgatgtcggtgccgtctttgtcggtaataacggagtt tattgccgttgtggtcaaggtatactgcatggagaaataatatgtagtgccaccgtgaagactaaacatgctgatatatg taaggcacctgatgacagtcaccaaccaaatactacacaagaacctttcatcgggaactgtcccaatgctgatcagttgg tgatagtacgaattcaggaggataagaacatagggtacctcacacatcaatttcatgtaaccgactggcacggcagggtt ttgacgtacttagtcagtcaggaaatttaccatatatgtaactgcacgcatcaacctctctatgaaaacatggccatatc agagcctgatgaatatggtaatgaaggtttttgctgttttaaagttattgtagaagatatatatcctccagtttttcgta cttgtccggagaataggatggtcagcagtggtcagtctgtttcttggatacagccacacgtttgggacaatgtaggggtc aagaatttgaccatgacacccaaaataaaaagtggtgcagtgtggcgtccagggatatacatggtggaatacgcagccgt ggactggtccggcaacagggcgtattgtcagtttagtgtcacagtattaggaggtcattcagatgtaaccgactccccag aacgatcatcatatcccatattgaccatcacctcctctataatcagcattatggcaatagcagtgttggttgttggagca cttacaattagaaaatgtcgccaaggaagtcgtctgcaagcaaacaacagttttctcagcagactccgagctgaaagaat tcgacatggacatagtttcggatctggcgggaatgacaacgcggtatttaccgtttacgactctgagccaccaccgtatg atattgccgtcagagataaactaccggactatatttcctcagattctcctccgccatatgaaagcacatctagcgatgaa cagaccggaagttcaacaatatctggtgccgcatccaatgcgactgtttgtgataattctcaaagtcgatatacattacg aaatgatggtgcatctcagaccgaaaacgctcaaaattcaaacagaagttcgattgtaaacattgttaatccagattcta tccatactgttgtgtga |
|
Protein
| Protein ID | pfu_aug1.0_2402.1_66310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2402.1_66310.t1 MLRFFFADLPSCDGLPYNSNPSLYEYIGCRTNSDCTSAEVCCSRNGTSKCHTTVRFYFQNCLYNGKYYDVGAVFVGNNGV YCRCGQGILHGEIICSATVKTKHADICKAPDDSHQPNTTQEPFIGNCPNADQLVIVRIQEDKNIGYLTHQFHVTDWHGRV LTYLVSQEIYHICNCTHQPLYENMAISEPDEYGNEGFCCFKVIVEDIYPPVFRTCPENRMVSSGQSVSWIQPHVWDNVGV KNLTMTPKIKSGAVWRPGIYMVEYAAVDWSGNRAYCQFSVTVLGGHSDVTDSPERSSYPILTITSSIISIMAIAVLVVGA LTIRKCRQGSRLQANNSFLSRLRAERIRHGHSFGSGGNDNAVFTVYDSEPPPYDIAVRDKLPDYISSDSPPPYESTSSDE QTGSSTISGAASNATVCDNSQSRYTLRNDGASQTENAQNSNRSSIVNIVNPDSIHTVV |
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