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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2402.1_66311
Locus scaffold2402.1 : 50686 ... 63528 : +
To GenomeBrowser scaffold2402.1:50686..63528
Genes list of scaffold scaffold2402.1
Synonym pfu_aug2.0_11777.1_26416

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2402.1_66311.t1 1 1 7tm_1 38 381 3.6e-22 78.7 7.5e-26 5.6e-22 78.1

Transcript
Transcript IDpfu_aug1.0_2402.1_66311.t1
Definition-
>pfu_aug1.0_2402.1_66311.t1
atggataaacataataacaccgatatcatgatgttatggaataggatattcgctgtgaaaagattaccgaataccatcat
catgtcactttttcttttgattgggatcgttggaaacgtactcgtactttttatgtacactctgaaaatgaaacgaggta
gacgtgatagatatttcatacccgtcttagctgtggccgatataactgcttgtgtggtcatatgtgtgtattcaattttt
gaaaatacatattcattagcatttccgtcggaccttttgtgccgtgcatcatggttcatgatgtggtttatgacgtcaat
ttccgccttcgttttgagtgtgatagcgttcagtcgatacctgaagatttgtagaccccatggaccacaaatgacgatca
tgagtaaaagaatagctcttttagggatattcgctgcttcaatagctctgtctgggcctcaggcacgatacacaggtagt
ttcattttcaacgacacccttgacaacgacactttttccgtggttacttgtgctccaggagatccggagcagaccgttca
aagtaccgtctacttttctttcgttttcatcatctatatcgtaaatgcagtgtttacgtcatttctttacgtagctgttg
gacgaattatctatacaacgtttcaaagcgcaaagatcaaaaggagatcggacgtcgtgagtcatatgccaactgtgacg
agcgattctcacgaagactatgagcaaagtacagtggacagaaagagacgacgaccaacgatcggaagtcctatttttga
acatgtaaagcgtaaacgtaaacctgagacaactccctcagatgatggtttacttcacgtccctacattaaacgaacctc
cgtcaagtgacatgtcagaatgtgtttctgaagcgaccgagaacaaaagaggtgacaatgctaggagtagtatgtccaga
aacgcgagtattgaaactttggatacattttcaattgaagaaagagtaccaaccataaatcgaattcgcagaaaacatgt
aaaaaggcgtgttcgagtgaactttaacctcatgtttttaacaattttcatcctttacgtcttgtcatatactccgtcat
tgatatttctgtttataaatgaaagcaacctaaaactgtggttcgacttcagggatgacgaggtatatgttggaatacgt
tataccgtcgggggcaagtcccgacggataactttatttccaacagtatatctaccatacaattttacttctctaatcgc
atatgaattcttttatatgactccaaaagttcgaaatccggagtgcgaagtccgaagtacgtcaacttggaaaatgtcta
ttaatacgttatatgatttcaaaatacgagaatgtgtgaaacagagaggagaagatgaaaatgtgaatatttaa

Protein
Protein IDpfu_aug1.0_2402.1_66311.t1
Definition-
>pfu_aug1.0_2402.1_66311.t1
MDKHNNTDIMMLWNRIFAVKRLPNTIIMSLFLLIGIVGNVLVLFMYTLKMKRGRRDRYFIPVLAVADITACVVICVYSIF
ENTYSLAFPSDLLCRASWFMMWFMTSISAFVLSVIAFSRYLKICRPHGPQMTIMSKRIALLGIFAASIALSGPQARYTGS
FIFNDTLDNDTFSVVTCAPGDPEQTVQSTVYFSFVFIIYIVNAVFTSFLYVAVGRIIYTTFQSAKIKRRSDVVSHMPTVT
SDSHEDYEQSTVDRKRRRPTIGSPIFEHVKRKRKPETTPSDDGLLHVPTLNEPPSSDMSECVSEATENKRGDNARSSMSR
NASIETLDTFSIEERVPTINRIRRKHVKRRVRVNFNLMFLTIFILYVLSYTPSLIFLFINESNLKLWFDFRDDEVYVGIR
YTVGGKSRRITLFPTVYLPYNFTSLIAYEFFYMTPKVRNPECEVRSTSTWKMSINTLYDFKIRECVKQRGEDENVNI

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