Gene
Gene Model ID | pfu_aug1.0_2407.1_15800 |
---|---|
Locus | scaffold2407.1 : 74524 ... 92535 : - |
To GenomeBrowser | scaffold2407.1:74524..92535 |
Genes list of scaffold | scaffold2407.1 |
Synonym | pfu_aug2.0_308.1_27198 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2407.1_15800.t1 | 1 | 1 | Zona_pellucida | 12 | 175 | 2.1e-09 | 37.2 | 2.3e-13 | 3.3e-09 | 36.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
maleGonad | 1 |
Transcript
Transcript ID | pfu_aug1.0_2407.1_15800.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2407.1_15800.t1 atgctcttccttaaggacaaacaatttcgtatagttgtacagaagcgatcggacgtacagacgggaggtgatctggtcat tcctatgctttgtatcttagatacgaatgatattatcgtacaaggttcacttaatcctgggaacgatctagatgaaacgg gtcgtaatattactgtacgtccgactgcccgaatgagagtgatgtcacgtggtcaagacgtcagcagaggagaagtcact ctaggagacttaatgtcaatggaaattaacctagatgaagagttcttagatgattttgacattagacccctagactgttc tgcagctaagattcaagtgataaaggacgggtgttcggatgataaagaattatttccagattttatgaatcgggactcgg gacatctgacctcagaattcagtgcgtttcaacccacaaacatagaagggggaggtgatgttgaagtccagtacacttgt ttgttgacagtttgcaaagggaagtgtgaaaaggaaacatgtgaagacccgaaacgagcaggtcgaaaaagaagagatac cgaagaaagagatcggataacatgcggaacatccgtaaaagtgaaaacacaaaaagaaatacctttaaaggaagaacaag agtcaaagctgtgtatggagaaaatcgctgcctttccagtcctagctgctacaggtctcatcatcttgggctcatggctc attatagcacgtttggcgcgaaaagtcatgatcatggagggaaaacatgacagtgatataggtgtggccagatccgtggg tagacgaatatcttcagtcttcaacttgccaacaggttataacttcaggagtcaaaatatactgacgacaatacccgaat atgaaggtattactccaccgcaacaacgccgaaaatcagtgacgatgatgagagttggatatttagataaccaatag |
Protein
Protein ID | pfu_aug1.0_2407.1_15800.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2407.1_15800.t1 MLFLKDKQFRIVVQKRSDVQTGGDLVIPMLCILDTNDIIVQGSLNPGNDLDETGRNITVRPTARMRVMSRGQDVSRGEVT LGDLMSMEINLDEEFLDDFDIRPLDCSAAKIQVIKDGCSDDKELFPDFMNRDSGHLTSEFSAFQPTNIEGGGDVEVQYTC LLTVCKGKCEKETCEDPKRAGRKRRDTEERDRITCGTSVKVKTQKEIPLKEEQESKLCMEKIAAFPVLAATGLIILGSWL IIARLARKVMIMEGKHDSDIGVARSVGRRISSVFNLPTGYNFRSQNILTTIPEYEGITPPQQRRKSVTMMRVGYLDNQ |