Gene
| Gene Model ID | pfu_aug1.0_24074.1_69609 |
|---|---|
| Locus | scaffold24074.1 : 5526 ... 17575 : + |
| To GenomeBrowser | scaffold24074.1:5526..17575 |
| Genes list of scaffold | scaffold24074.1 |
| Synonym | pfu_aug2.0_2553.1_12201 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24074.1_69609.t1 | 7 | 1 | TPR_11 | 18 | 63 | 3.1e-32 | 110.0 | 2.7e-08 | 2.8e-05 | 23.6 |
| pfu_aug1.0_24074.1_69609.t1 | 5 | 1 | TPR_16 | 18 | 62 | 5.1e-16 | 58.8 | 0.034 | 36.0 | 5.1 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 1 | TPR_19 | 18 | 56 | 1.0e-11 | 45.0 | 0.032 | 34.0 | 4.8 |
| pfu_aug1.0_24074.1_69609.t1 | 6 | 1 | TPR_14 | 18 | 40 | 7.8e-07 | 29.1 | 0.43 | 460.0 | 1.9 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 1 | Apc3 | 29 | 94 | 3.6e-13 | 49.4 | 5.1e-05 | 0.054 | 13.6 |
| pfu_aug1.0_24074.1_69609.t1 | 8 | 1 | TPR_1 | 38 | 63 | 8.4e-14 | 50.5 | 0.0011 | 1.1 | 8.9 |
| pfu_aug1.0_24074.1_69609.t1 | 9 | 1 | TPR_2 | 40 | 63 | 6.1e-15 | 53.8 | 0.084 | 89.0 | 3.3 |
| pfu_aug1.0_24074.1_69609.t1 | 7 | 2 | TPR_11 | 78 | 105 | 3.1e-32 | 110.0 | 0.013 | 14.0 | 5.4 |
| pfu_aug1.0_24074.1_69609.t1 | 9 | 2 | TPR_2 | 78 | 104 | 6.1e-15 | 53.8 | 0.66 | 700.0 | 0.5 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 1 | TPR_7 | 78 | 104 | 1.5e-06 | 27.5 | 0.084 | 89.0 | 3.2 |
| pfu_aug1.0_24074.1_69609.t1 | 8 | 2 | TPR_1 | 82 | 104 | 8.4e-14 | 50.5 | 0.25 | 260.0 | 1.4 |
| pfu_aug1.0_24074.1_69609.t1 | 5 | 2 | TPR_16 | 190 | 240 | 5.1e-16 | 58.8 | 1.3e-06 | 0.0014 | 19.2 |
| pfu_aug1.0_24074.1_69609.t1 | 7 | 3 | TPR_11 | 193 | 238 | 3.1e-32 | 110.0 | 6.0e-06 | 0.0064 | 16.1 |
| pfu_aug1.0_24074.1_69609.t1 | 8 | 3 | TPR_1 | 196 | 216 | 8.4e-14 | 50.5 | 0.1 | 110.0 | 2.6 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 2 | TPR_19 | 196 | 243 | 1.0e-11 | 45.0 | 0.0065 | 6.9 | 7.0 |
| pfu_aug1.0_24074.1_69609.t1 | 9 | 3 | TPR_2 | 197 | 216 | 6.1e-15 | 53.8 | 0.011 | 12.0 | 6.0 |
| pfu_aug1.0_24074.1_69609.t1 | 6 | 2 | TPR_14 | 197 | 225 | 7.8e-07 | 29.1 | 0.1 | 110.0 | 3.9 |
| pfu_aug1.0_24074.1_69609.t1 | 1 | 1 | zf-MYND | 393 | 418 | 3.2e-08 | 33.2 | 7.5e-11 | 7.9e-08 | 32.0 |
| pfu_aug1.0_24074.1_69609.t1 | 7 | 4 | TPR_11 | 488 | 547 | 3.1e-32 | 110.0 | 1.4e-09 | 1.5e-06 | 27.7 |
| pfu_aug1.0_24074.1_69609.t1 | 5 | 3 | TPR_16 | 490 | 534 | 5.1e-16 | 58.8 | 6.5e-06 | 0.0069 | 17.0 |
| pfu_aug1.0_24074.1_69609.t1 | 9 | 4 | TPR_2 | 490 | 513 | 6.1e-15 | 53.8 | 0.0005 | 0.53 | 10.3 |
| pfu_aug1.0_24074.1_69609.t1 | 8 | 4 | TPR_1 | 491 | 508 | 8.4e-14 | 50.5 | 0.04 | 42.0 | 3.9 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 2 | Apc3 | 491 | 534 | 3.6e-13 | 49.4 | 3.6e-07 | 0.00038 | 20.5 |
| pfu_aug1.0_24074.1_69609.t1 | 6 | 3 | TPR_14 | 491 | 520 | 7.8e-07 | 29.1 | 0.026 | 27.0 | 5.7 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 3 | TPR_19 | 494 | 535 | 1.0e-11 | 45.0 | 6.5e-07 | 0.00069 | 19.9 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 2 | TPR_7 | 496 | 513 | 1.5e-06 | 27.5 | 0.0035 | 3.7 | 7.5 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 3 | Apc3 | 498 | 576 | 3.6e-13 | 49.4 | 9.1e-12 | 9.6e-09 | 35.2 |
| pfu_aug1.0_24074.1_69609.t1 | 6 | 4 | TPR_14 | 520 | 550 | 7.8e-07 | 29.1 | 0.16 | 170.0 | 3.3 |
| pfu_aug1.0_24074.1_69609.t1 | 9 | 5 | TPR_2 | 522 | 550 | 6.1e-15 | 53.8 | 1.4e-05 | 0.015 | 15.1 |
| pfu_aug1.0_24074.1_69609.t1 | 8 | 5 | TPR_1 | 522 | 550 | 8.4e-14 | 50.5 | 3.5e-06 | 0.0037 | 16.8 |
| pfu_aug1.0_24074.1_69609.t1 | 7 | 5 | TPR_11 | 559 | 591 | 3.1e-32 | 110.0 | 9.2e-05 | 0.097 | 12.3 |
| pfu_aug1.0_24074.1_69609.t1 | 5 | 4 | TPR_16 | 559 | 590 | 5.1e-16 | 58.8 | 0.001 | 1.1 | 10.0 |
| pfu_aug1.0_24074.1_69609.t1 | 9 | 6 | TPR_2 | 559 | 585 | 6.1e-15 | 53.8 | 0.00059 | 0.63 | 10.1 |
| pfu_aug1.0_24074.1_69609.t1 | 8 | 6 | TPR_1 | 559 | 584 | 8.4e-14 | 50.5 | 6.8e-05 | 0.072 | 12.7 |
| pfu_aug1.0_24074.1_69609.t1 | 6 | 5 | TPR_14 | 559 | 589 | 7.8e-07 | 29.1 | 0.15 | 160.0 | 3.3 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 3 | TPR_7 | 559 | 586 | 1.5e-06 | 27.5 | 0.025 | 27.0 | 4.9 |
| pfu_aug1.0_24074.1_69609.t1 | 7 | 6 | TPR_11 | 663 | 713 | 3.1e-32 | 110.0 | 8.9e-08 | 9.4e-05 | 21.9 |
| pfu_aug1.0_24074.1_69609.t1 | 8 | 7 | TPR_1 | 671 | 697 | 8.4e-14 | 50.5 | 0.009 | 9.6 | 6.0 |
| pfu_aug1.0_24074.1_69609.t1 | 9 | 7 | TPR_2 | 674 | 697 | 6.1e-15 | 53.8 | 0.001 | 1.1 | 9.4 |
| pfu_aug1.0_24074.1_69609.t1 | 6 | 6 | TPR_14 | 674 | 706 | 7.8e-07 | 29.1 | 0.023 | 24.0 | 5.9 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 4 | TPR_19 | 675 | 710 | 1.0e-11 | 45.0 | 0.0011 | 1.2 | 9.5 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 4 | TPR_7 | 675 | 696 | 1.5e-06 | 27.5 | 0.075 | 79.0 | 3.4 |
| pfu_aug1.0_24074.1_69609.t1 | 5 | 5 | TPR_16 | 677 | 712 | 5.1e-16 | 58.8 | 0.0088 | 9.3 | 7.0 |
| pfu_aug1.0_24074.1_69609.t1 | 7 | 7 | TPR_11 | 731 | 776 | 3.1e-32 | 110.0 | 0.14 | 150.0 | 2.1 |
| pfu_aug1.0_24074.1_69609.t1 | 9 | 8 | TPR_2 | 738 | 761 | 6.1e-15 | 53.8 | 0.61 | 640.0 | 0.7 |
| pfu_aug1.0_24074.1_69609.t1 | 4 | 4 | Apc3 | 750 | 777 | 3.6e-13 | 49.4 | 0.72 | 760.0 | 0.3 |
| pfu_aug1.0_24074.1_69609.t1 | 8 | 8 | TPR_1 | 759 | 775 | 8.4e-14 | 50.5 | 0.16 | 170.0 | 2.0 |
| pfu_aug1.0_24074.1_69609.t1 | 9 | 9 | TPR_2 | 760 | 775 | 6.1e-15 | 53.8 | 0.13 | 140.0 | 2.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_24074.1_69609.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24074.1_69609.t1 atgacgaatccagaggaaagacctaaacctggaatagaaagtggtacagcaaaactagaaaaagctatagcaggattaac agaggcaatccaaaatggcaacgataatgcagaaatgttcatcagtagagccacttgtcacatcaaactgtccaaatttt acaaagcgcttgaagacgcaaaggaagccaggctgagaggggaacagagcgtcaatttagctttaattggaggtgacgca gccgtaaatctgtcaaaaatggaggacgcatgtagcttttacacgatgggactgaaagtcgaccctaccaataccagtgt cacagatcgtctgcaaatgctacaggaaatgattttacccgattacgacctcgagggcgggtgtgactccgatcaaggat atagtgcagttactctattcaaccaggaaccatatccaggtgatgatgaactgattagcaaagagaaacagaccatcctg gccaagttttgtctcgaagacacagaaccgtggaaagaaaatgtcgaggacgctgaaaaacaaagagcgtccaacattgc aatgggggcacacgaattcatggttgacaataagctagaagatgcattgaaagaatatacattagccgtcaaagcggacc ccggtaattccattttgaggcgtctgagagcggaagttctgtacattctggacgacaagtatgccgctctccgggaatta tgggcagttccaacagagaagaaatcactcgatgtatggaagtttggaggacaaatactatatgaaattaacatgccact ccacgccgaagtttggctgaaaacagcgacgaagatgaccggtaaccaggacgatgcggctaaagtattgttccaaaaag cacgaacccaccgactttactcggcgatgagcaaggattttcccatcaacatagattttggtgaacatggaagaagtata tttgctacaaaggaaattaaaactggcaatgaagtattcactgacctgccaatggttatggggaaaatgctcgataaaga gacgtacggtcaggacatatgtgacaactgcgcaacttcccttatgacgtcgagagattattttggaggcaggttcgaat cgttagcagacgatgtgaaaagtttggtagaagaatattggcctaatatttcaataaccacgtgtgataaatgcaaggtc acgaagtactgtagcgctgaatgtcaggaagacgcatggaaaagccatcacgaggtcttatgcccagcaagatgcgaagc agcgagaaaattacatgacatttcagaaaattttgggcatggcaaaaacgagcacggtgaaacggtggaattgtgggacg ccctgtactacactaacatacatcaccaggtcaggatagaatgtgctggaaggaaagaagttcttagaataaaagttaca atggattcaactgaggaaaagacgaaagaagcctatgctctgtacaaagatggcgactacaagtccgccatcaacctcta cacctctctattatcagagagtgaggacgcagctcacctggcaatgcgtgcagactgctattttaaacttgaggactatg cgtcttgtctcgatgacgccaagagggtcatagctttggacgaggataactgtataacatcagcagttcttggaggccag gcagcaaccaaactggagaagtatgaagacgcatatcattgttataaggcgggaatcaaagcccagcctggtcacccgga tgtcgtctccggcttgcgcaccttaaagagcctgattttgaaggatatggacaaaaaaggcagcgagtgtgaggagaagg ggtacaacgcacttgacttctgtagtcaggaggtgtatcctggtgacgacgaattatttacaaacgagattgaaatcctt tccagaatgtacaagatacaagcagagactttgtctccgagtcctaaagatcccaaaatcatggagcaagccgcaaacgc cgcattgtcaggccataaatgcatgacggaagggaagtggtcggatgccgtgaaattgttttctgtcgcccttgaccttg accccagtaaccacattctgcggcgactgagagcggaagttcatttcatgagagatgacgccataagttgtctgcgtgat ctgtggctcatccctaaaatgagcagaatggccgatgcctggaagttaggaggaaaaattctctggcagttggagttgtt ggtagtagcagaattttggttcagaaaagcaacacagctgtcgcaaggcaaagaccaggaagcaaaagttcttttccaga aagctcgagtaactcgtctttacggtccactgactcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnntggaattcccggtgaaagtagatttcaccgagtacggacgagcaatattcgcaaaagaag acattaa |
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Protein
| Protein ID | pfu_aug1.0_24074.1_69609.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24074.1_69609.t1 MTNPEERPKPGIESGTAKLEKAIAGLTEAIQNGNDNAEMFISRATCHIKLSKFYKALEDAKEARLRGEQSVNLALIGGDA AVNLSKMEDACSFYTMGLKVDPTNTSVTDRLQMLQEMILPDYDLEGGCDSDQGYSAVTLFNQEPYPGDDELISKEKQTIL AKFCLEDTEPWKENVEDAEKQRASNIAMGAHEFMVDNKLEDALKEYTLAVKADPGNSILRRLRAEVLYILDDKYAALREL WAVPTEKKSLDVWKFGGQILYEINMPLHAEVWLKTATKMTGNQDDAAKVLFQKARTHRLYSAMSKDFPINIDFGEHGRSI FATKEIKTGNEVFTDLPMVMGKMLDKETYGQDICDNCATSLMTSRDYFGGRFESLADDVKSLVEEYWPNISITTCDKCKV TKYCSAECQEDAWKSHHEVLCPARCEAARKLHDISENFGHGKNEHGETVELWDALYYTNIHHQVRIECAGRKEVLRIKVT MDSTEEKTKEAYALYKDGDYKSAINLYTSLLSESEDAAHLAMRADCYFKLEDYASCLDDAKRVIALDEDNCITSAVLGGQ AATKLEKYEDAYHCYKAGIKAQPGHPDVVSGLRTLKSLILKDMDKKGSECEEKGYNALDFCSQEVYPGDDELFTNEIEIL SRMYKIQAETLSPSPKDPKIMEQAANAALSGHKCMTEGKWSDAVKLFSVALDLDPSNHILRRLRAEVHFMRDDAISCLRD LWLIPKMSRMADAWKLGGKILWQLELLVVAEFWFRKATQLSQGKDQEAKVLFQKARVTRLYGPLTXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXGIPGESRFHRVRTSNIRKRRH |
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