Gene
Gene Model ID | pfu_aug1.0_2408.1_15804 |
---|---|
Locus | scaffold2408.1 : 41665 ... 54745 : - |
To GenomeBrowser | scaffold2408.1:41665..54745 |
Genes list of scaffold | scaffold2408.1 |
Synonym | pfu_aug2.0_1137.1_24711 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2408.1_15804.t1 | 1 | 1 | Homeobox | 234 | 290 | 2.5e-19 | 68.6 | 1.0e-22 | 5.1e-19 | 67.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2408.1_15804.t1 | gi|66571114|gb|AAY51522.1| | IP08859p [Drosophila melanogaster] | 4.99983e-42 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-Dshape | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_2408.1_15804.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2408.1_15804.t1 atgatgtatcgtgatacaaatcgcatcatgagtaaatatcgtgatatgtatcctatcctgagctcactcggtaacgtgct ggactacagagcggatgaccggggttccaatcctggtacctgcaacttcttcattggcgacgagatttcattctcacaag gaaactttggagccgttagggggcagactcggaaggacaaagttatacaacacagaatggattttgcacgaaaggaggaa acagaatctaaaacgagtctgaatgacttccgttcaaaaaccagtttcgcaatggatctttccggcactaagagtgaaac tttgcagcagatgaaaagttgcgaggaacataaaaacacaatgagtgctactgaaaacaataatgacaatagaaaaatga gcctaaattttggaatagagactattttacatggagaaaaatccgtgaaaaaccaagaagaatcgtcaatttcaaatgac gtcacaacaacagtgcaatccaacattcaaaaaatgaactcaagctacctctgtggatggtatggacacgttctctccag gtttccgcgggaaaacacacgttctttttcatctccaaacattgacatgaactggtctatgcaagaagcacataaagagc gatttgctgcgacaagaagagtaggacatccgtaccaaaatcgatcaccaccgaagcgtaaaaagccacgtacatctttc acacggatcaccgttatggaattggagaagcgatttgaacgccaaaaatacttggcgtcgtcggaacgcacaacgttggc aaagacgctcaaaatttcagattctcaggtgaaaacatggtttcaaaacagacgcacaaaatggagacgacaagccgcag aggagaaagagctagaaagacagagcacgaaccgacttcttctgagtatgacgtcattctcttcgaaacagatttgtgct gatgtgggaagaacatccaactag |
Protein
Protein ID | pfu_aug1.0_2408.1_15804.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2408.1_15804.t1 MMYRDTNRIMSKYRDMYPILSSLGNVLDYRADDRGSNPGTCNFFIGDEISFSQGNFGAVRGQTRKDKVIQHRMDFARKEE TESKTSLNDFRSKTSFAMDLSGTKSETLQQMKSCEEHKNTMSATENNNDNRKMSLNFGIETILHGEKSVKNQEESSISND VTTTVQSNIQKMNSSYLCGWYGHVLSRFPRENTRSFSSPNIDMNWSMQEAHKERFAATRRVGHPYQNRSPPKRKKPRTSF TRITVMELEKRFERQKYLASSERTTLAKTLKISDSQVKTWFQNRRTKWRRQAAEEKELERQSTNRLLLSMTSFSSKQICA DVGRTSN |