Gene
| Gene Model ID | pfu_aug1.0_24105.1_69612 |
|---|---|
| Locus | scaffold24105.1 : 1 ... 8103 : + |
| To GenomeBrowser | scaffold24105.1:1..8103 |
| Genes list of scaffold | scaffold24105.1 |
| Synonym | pfu_aug2.0_403.1_10732 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24105.1_69612.t1 | 3 | 1 | UBA | 20 | 46 | 9.3e-18 | 63.5 | 5.0e-08 | 9.3e-05 | 22.1 |
| pfu_aug1.0_24105.1_69612.t1 | 3 | 1 | UBA_4 | 22 | 48 | 5.8e-06 | 25.7 | 0.00042 | 0.78 | 9.3 |
| pfu_aug1.0_24105.1_69612.t1 | 3 | 2 | UBA | 88 | 118 | 9.3e-18 | 63.5 | 7.1e-05 | 0.13 | 12.1 |
| pfu_aug1.0_24105.1_69612.t1 | 3 | 2 | UBA_4 | 103 | 115 | 5.8e-06 | 25.7 | 0.37 | 680.0 | -0.1 |
| pfu_aug1.0_24105.1_69612.t1 | 3 | 3 | UBA | 138 | 174 | 9.3e-18 | 63.5 | 9.8e-10 | 1.8e-06 | 27.5 |
| pfu_aug1.0_24105.1_69612.t1 | 3 | 3 | UBA_4 | 150 | 176 | 5.8e-06 | 25.7 | 5.5e-05 | 0.1 | 12.1 |
Transcript
| Transcript ID | pfu_aug1.0_24105.1_69612.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24105.1_69612.t1 gaagaatgaatgcaacctatctattattgattatgcaggtcgatacatcgattttattggaatgggatttaaggaacaag aggcccggttaggattgagagcctcccgtggtgatattgaaagggcagtacaacacattatgcaaaggagagaggaaaaa gctgagatagggaaaaaagtgaaggaagagagaagaaagaagaaattacaaaaagatttaggaaagacggcatctggtga attgataaatgtggataactatgaggtgctgattggtatggggttcaacaagggggcatcagcagaggcactgagacaag ctaataatgatatcagtgcagcactagaagtattacaaaatcatccagagttactgtccttgcctgaccctgctccatcc ccaggccagtcaatcaccgacgagatgatttctacagtggttggacttggttttgatgcagaaatggcccgtagggctct ccagcagtttgacagtaatatacaacgagctatagaagcactgatacagaacggaggcttcctggcgccctcacctacag aatcagggggcagtaactctgattctggtgcctcaagcagctcttcggaagatgacagattgaagaagcagcaagaggaa aaaaagatcagagatttagtttcggacattccacaagacgaggaagattatctggacctgaaactggacgaagaggctca catattgcaagagtacatggggcttttgcagagtgttttatctacaaagcaatga |
|
Protein
| Protein ID | pfu_aug1.0_24105.1_69612.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24105.1_69612.t1 KNECNLSIIDYAGRYIDFIGMGFKEQEARLGLRASRGDIERAVQHIMQRREEKAEIGKKVKEERRKKKLQKDLGKTASGE LINVDNYEVLIGMGFNKGASAEALRQANNDISAALEVLQNHPELLSLPDPAPSPGQSITDEMISTVVGLGFDAEMARRAL QQFDSNIQRAIEALIQNGGFLAPSPTESGGSNSDSGASSSSSEDDRLKKQQEEKKIRDLVSDIPQDEEDYLDLKLDEEAH ILQEYMGLLQSVLSTKQ |
|