Gene
| Gene Model ID | pfu_aug1.0_24112.1_11591 |
|---|---|
| Locus | scaffold24112.1 : 877 ... 19421 : - |
| To GenomeBrowser | scaffold24112.1:877..19421 |
| Genes list of scaffold | scaffold24112.1 |
| Synonym | NA |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | beta-1,3-N-acetylglucosaminyltransferase radical fringe like 2 |
| Description | Best hit Bos taurus fng by NCBI BLAST. beta-1,3-N-acetylglucosaminyltransferase radical fringe like 2likes beta-1,3-N-acetylglucosaminyltransferase radical fringe like. |
| mRNA evidence |
| Study field | signal molecules |
|---|---|
| Gene name | beta-1,3-N-acetylglucosaminyltransferase radical fringe, putative like 2 |
| Description | Best hit beta-1,3-N-acetylglucosaminyltransferase radical fringe, putative [Ixodes scapularis] by NCBI BLAST |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24112.1_11591.t1 | 1 | 1 | Fringe | 1 | 77 | 8.4e-26 | 90.6 | 7.3e-30 | 1.1e-25 | 90.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24112.1_11591.t1 | gi|340721222|ref|XP_003399023.1| | 3.0e-17 |
Transcript
| Transcript ID | pfu_aug1.0_24112.1_11591.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24112.1_11591.t1 ttggttttgtcatgtcgacgacgacaattaccttaatgttgacctactactacaaatgttaagggggtatgacccctcag agctgtggtatttaggcagagcaagtcgtgatcatccagttacgccaccaagaaaaaacctgaaacatattaagttttgg tttgcaacacttggtgctggcgtctgtattagcaaagctttagcaaagaaaatgttgccacatgcgagaaattttgcttt aaattgtaaatatttacacaaaaagagttataattcaacattgaatattgaaccgcatgagaagggtcattattcagcgt tgaatgttgacccgcaccggaaagcgggtattttggtgctttgttgtgagtgctgcaaccgactccggttggaggtcctc tcctatcttcaagataggacaaaggatcaaggtccagtcttttttggcgagattcgagaaatctcctag |
|
Protein
| Protein ID | pfu_aug1.0_24112.1_11591.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24112.1_11591.t1 WFCHVDDDNYLNVDLLLQMLRGYDPSELWYLGRASRDHPVTPPRKNLKHIKFWFATLGAGVCISKALAKKMLPHARNFAL NCKYLHKKSYNSTLNIEPHEKGHYSALNVDPHRKAGILVLCCECCNRLRLEVLSYLQDRTKDQGPVFFGEIREIS |
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