Gene
Gene Model ID | pfu_aug1.0_2417.1_30111 |
---|---|
Locus | scaffold2417.1 : 16456 ... 19056 : + |
To GenomeBrowser | scaffold2417.1:16456..19056 |
Genes list of scaffold | scaffold2417.1 |
Synonym | pfu_aug2.0_98.1_26830 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2417.1_30111.t1 | 2 | 1 | Dimer_Tnp_hAT | 76 | 114 | 2.1e-08 | 33.6 | 0.056 | 420.0 | 0.6 |
pfu_aug1.0_2417.1_30111.t1 | 2 | 2 | Dimer_Tnp_hAT | 323 | 377 | 2.1e-08 | 33.6 | 4.3e-11 | 3.2e-07 | 29.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2417.1_30111.t1 | gi|270016829|gb|EFA13275.1| | 3.0e-23 |
Transcript
Transcript ID | pfu_aug1.0_2417.1_30111.t1 |
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Definition | - |
>pfu_aug1.0_2417.1_30111.t1 atgtttccggattcaaaaatcgctcagaattttaaatgcaaacgtacgaagacaacaaacttaatcaacaatgcgatcgc acccttctacgatgaagaagtaacagaattgtgcaaaaaacagaagttttgcttaatgatcgacgaatcaaatgacaaat caaatgacgaatcaaatgacaaaggcgatgataaatgtttgatcattttggtcaggatatttgatcctaacattaggaaa atcgtcccgaagttccttggaataccatcctgtaatctaagttctgcagagaacctgtttgcctgcatagacaaagtctt cagtgctaaaagacaagaacaatacaaggagtatttagatttcacggacacagacccgttgaagatagtcaaattctgct caacacgttggcttagcttagataagtccatagctaggatccttcatcactggagtgcgctaaagagctactttaacagt tatcctgactcagacacccctggtagagccaagagatgcaaggatctactcaactcccatgatcttcatgtctactacct gtttctcaaattcattctacctgtattaaatgagttcaacatgacattccagagccaagcttccatgatcggctttatac ctacagaaactgtgaggcttctgagacgactgttggggaaattcatttctactagggccattgtatcaaaacgcttgact gacattgatattgatgacaaagaaaaccacttctcagatgacctactagcagttggtctagagacacgggagtacatcaa agaaaatgaagatgaccttcctattcagttnaaagaagatgtggaaaatgaagctttggactatatcttgggaaatgact ctgaccttcctgcacttgcagagaacaacgatctagtgcaattttgggttgccatctctgaagttaaacttcctgatgga aagttcctctattctaatttatcaaagttggctttggatgtgctatgtgtggcacattcaaatgctgatgctgagagaag tttcagtattctcagaaaaatccagacagatttgaggggaaatatgggaaaagagacactacatggacttttgtgctgca aatttaacattacttcacaatgttatgactacactgcaccttctaaagtgaaagagagtacaacaaaagcttgtaactaa |
Protein
Protein ID | pfu_aug1.0_2417.1_30111.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2417.1_30111.t1 MFPDSKIAQNFKCKRTKTTNLINNAIAPFYDEEVTELCKKQKFCLMIDESNDKSNDESNDKGDDKCLIILVRIFDPNIRK IVPKFLGIPSCNLSSAENLFACIDKVFSAKRQEQYKEYLDFTDTDPLKIVKFCSTRWLSLDKSIARILHHWSALKSYFNS YPDSDTPGRAKRCKDLLNSHDLHVYYLFLKFILPVLNEFNMTFQSQASMIGFIPTETVRLLRRLLGKFISTRAIVSKRLT DIDIDDKENHFSDDLLAVGLETREYIKENEDDLPIQXKEDVENEALDYILGNDSDLPALAENNDLVQFWVAISEVKLPDG KFLYSNLSKLALDVLCVAHSNADAERSFSILRKIQTDLRGNMGKETLHGLLCCKFNITSQCYDYTAPSKVKESTTKACN |