Gene
| Gene Model ID | pfu_aug1.0_24172.1_47639 |
|---|---|
| Locus | scaffold24172.1 : 1 ... 8796 : + |
| To GenomeBrowser | scaffold24172.1:1..8796 |
| Genes list of scaffold | scaffold24172.1 |
| Synonym | pfu_aug2.0_55.1_16817 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24172.1_47639.t1 | 2 | 1 | BACK | 5 | 29 | 1.3e-17 | 63.5 | 0.064 | 470.0 | 0.6 |
| pfu_aug1.0_24172.1_47639.t1 | 2 | 2 | BACK | 37 | 133 | 1.3e-17 | 63.5 | 1.3e-20 | 9.9e-17 | 60.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24172.1_47639.t1 | gi|260830659|ref|XP_002610278.1| | hypothetical protein BRAFLDRAFT_93002 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_24172.1_47639.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24172.1_47639.t1 gaagagaacctccttgacattttgggcctggcacatagatttggatttgaggaactagagacgtcaatctctgattatct taaagctatattgaataactccaacgtgtgtttgatatatgacattgccaacatgtacagtctgacgtccctgtgcttgg tgtgtaaggaattcatagacaggaacgcacaggacattctcacagatgaagctttcctgaatctctctcagagttcagtt actgcattgatatctagaagttcattctacgccccagaaatagacattttcaattcagtaaaggactgggcagatcataa ccaaggaatagatgcctcaccaatccttgagtctgtccgtctgtctcttatgtccatggacgaactactgaacaaagtaa gacccacaggacttgtgtctgccgattctatattagatgccataaaaacccagacagaatcacggatacttgaccttcag tataggggactgctagttcccacagagaatgttgcaacgatagatgcctgtgcctgtgtgatagagggcgtaagccgtag tcgtaatgctctgataaacggtgacacaagacactatgactgggactcaggatatacctgtcaccagctagggagtggag ctatcattgtacagcttgcccagccgtatatggctgaaactatgaggttgttattatgggactgtgatgacagaagctac agttattatgtagaagtatcgaccgatcagaaatcatggaaaatggtggcagatcgtagaaacgagggttgcaagtga |
|
Protein
| Protein ID | pfu_aug1.0_24172.1_47639.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24172.1_47639.t1 EENLLDILGLAHRFGFEELETSISDYLKAILNNSNVCLIYDIANMYSLTSLCLVCKEFIDRNAQDILTDEAFLNLSQSSV TALISRSSFYAPEIDIFNSVKDWADHNQGIDASPILESVRLSLMSMDELLNKVRPTGLVSADSILDAIKTQTESRILDLQ YRGLLVPTENVATIDACACVIEGVSRSRNALINGDTRHYDWDSGYTCHQLGSGAIIVQLAQPYMAETMRLLLWDCDDRSY SYYVEVSTDQKSWKMVADRRNEGCK |
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