Gene
| Gene Model ID | pfu_aug1.0_2418.1_58901 |
|---|---|
| Locus | scaffold2418.1 : 5186 ... 34254 : + |
| To GenomeBrowser | scaffold2418.1:5186..34254 |
| Genes list of scaffold | scaffold2418.1 |
| Synonym | pfu_aug2.0_6189.1_32867 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2418.1_58901.t1 | 2 | 1 | Nup54 | 145 | 161 | 3.8e-25 | 88.1 | 0.4 | 5900.0 | -3.2 |
| pfu_aug1.0_2418.1_58901.t1 | 2 | 2 | Nup54 | 351 | 450 | 3.8e-25 | 88.1 | 2.6e-29 | 3.8e-25 | 88.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2418.1_58901.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2418.1_58901.t1 atgatttttggtggttccactggaagcatcactgatgagaatttaatattcgaaacacgatttggtggatttggcactca acccaaaacaacagcatcaacaggatttggatttacagggtttggaggatttggcactcagcctaaaaccaccgcagcag gaactacagggttgggatttggtacaggaacaagtacagggaccactggatttggattcggagcaggaacaagcggcacc acaacaggtacatttggatttggtggtaccactacatctaccgcccccaccggatttggatttggaggtgggaccactgg attgggaactggaacatcaacaggattttctgggtttgggacaacaggtggtactacaggttttgggttagggacagggg gcactactcttggaggatttggacttggcgctcagcaacagcagcagcaacaacaacaagccagctccaccctcgagaac ctaggcacagccgttactctaccacagatatatggtgatgagagggacgctatcatagccaagtggaaccagttactggc ttactggggtactggtaaaggctactatagtcagaatggagcggtagatttcacctcagaaaatccatactgcagattta aggctgttggatacacaaggctgcctagaactaagaacgaggatggccttgtgtctatatttatcaacaagaaggaaagt gacgtgacgaccaatcaacaacagatacaagacacactattcaagataatggggagtagaccacagttctcagtgtgtgt ggagggcatcaagagacttccagatgacaagacagaactggtaatatatatcctggagagacccgctacaggcccggcca ggagggtacccgccagcgacacgtttaacttcctcaatcagccggcacagcaaggccagctaaaaacacagctagatgta cagagtgtgatacctaagacaggactcactgatcaggcactgaaggaatacttggatacacctcctgctggaattcatcc attgctatggcaacaagcaaagaccaaggcacatcaacaaagactggatcttatagcctcagatctgcaggaattacagc agaaagagagtaatatggtggccaagttagaggaattcaagtgtaaatatctggaactatcacacagaatactgaaggtt gtggtaaaacaggaaatttctaggaaaatgggatatgccattcaggcagaggaggaacaactcagagtacaactagaaaa aatacaattagagcttaaccatcctacacagttcaaaggacgtttaaatgaattgatgtcacagatccgtatgcaaaatc agttatctgggtcaaggtcagatgtaagttaccagctagatgcaggtctgcagcaagaaattaaacaggtcctgttgatg ttggtatttgccaacttccgtcacaacgtcatgtttgctttcacaactttccactcacaatga |
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Protein
| Protein ID | pfu_aug1.0_2418.1_58901.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2418.1_58901.t1 MIFGGSTGSITDENLIFETRFGGFGTQPKTTASTGFGFTGFGGFGTQPKTTAAGTTGLGFGTGTSTGTTGFGFGAGTSGT TTGTFGFGGTTTSTAPTGFGFGGGTTGLGTGTSTGFSGFGTTGGTTGFGLGTGGTTLGGFGLGAQQQQQQQQQASSTLEN LGTAVTLPQIYGDERDAIIAKWNQLLAYWGTGKGYYSQNGAVDFTSENPYCRFKAVGYTRLPRTKNEDGLVSIFINKKES DVTTNQQQIQDTLFKIMGSRPQFSVCVEGIKRLPDDKTELVIYILERPATGPARRVPASDTFNFLNQPAQQGQLKTQLDV QSVIPKTGLTDQALKEYLDTPPAGIHPLLWQQAKTKAHQQRLDLIASDLQELQQKESNMVAKLEEFKCKYLELSHRILKV VVKQEISRKMGYAIQAEEEQLRVQLEKIQLELNHPTQFKGRLNELMSQIRMQNQLSGSRSDVSYQLDAGLQQEIKQVLLM LVFANFRHNVMFAFTTFHSQ |
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