Gene
| Gene Model ID | pfu_aug1.0_2418.1_58905 |
|---|---|
| Locus | scaffold2418.1 : 72379 ... 84385 : - |
| To GenomeBrowser | scaffold2418.1:72379..84385 |
| Genes list of scaffold | scaffold2418.1 |
| Synonym | pfu_aug2.0_2905.1_18964 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2418.1_58905.t1 | 2 | 1 | EGF | 45 | 73 | 1.8e-17 | 62.9 | 1.2e-09 | 2.6e-06 | 27.2 |
| pfu_aug1.0_2418.1_58905.t1 | 2 | 1 | EGF_2 | 45 | 77 | 3.7e-09 | 36.5 | 2.0e-06 | 0.0043 | 17.1 |
| pfu_aug1.0_2418.1_58905.t1 | 2 | 2 | EGF | 83 | 111 | 1.8e-17 | 62.9 | 4.4e-14 | 9.4e-11 | 41.4 |
| pfu_aug1.0_2418.1_58905.t1 | 2 | 2 | EGF_2 | 87 | 114 | 3.7e-09 | 36.5 | 6.1e-09 | 1.3e-05 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2418.1_58905.t1 | gi|327280186|ref|XP_003224834.1| | 2.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 2 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2418.1_58905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2418.1_58905.t1 atgcagatacctgcatcaacggaaaactatagattcatttcttataattttattatcatctacttgtggaaaacagacta ttttttggatctacaaataataaatcaccgcactatatttcatgttgataattgtccaccttctaacccctgtcaacata acggtacatgtatggatttatacagacgttacacatgtaaatgcccacacggatacaaaccactggattgttcacacaag gtaacttgtgctgattttccatgtaaaaacaatggaacatgtgtggacactggtactatgtacatatgtgtttgtccaaa aggattcactggcttagactgcgaaacgaaactccatataaatgtcgataattcgaattccaacgtacttcctatagttt tgggtgttataactggtgctggaatagttgccatgacgactgcatgctgctgttggtggtttttactcgctggaaaaaga ccgaggtcaagggaacgaaaggtcaaaccaaaggaactacccgaaaatggactcgatactctataa |
|
Protein
| Protein ID | pfu_aug1.0_2418.1_58905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2418.1_58905.t1 MQIPASTENYRFISYNFIIIYLWKTDYFLDLQIINHRTIFHVDNCPPSNPCQHNGTCMDLYRRYTCKCPHGYKPLDCSHK VTCADFPCKNNGTCVDTGTMYICVCPKGFTGLDCETKLHINVDNSNSNVLPIVLGVITGAGIVAMTTACCCWWFLLAGKR PRSRERKVKPKELPENGLDTL |
|