Gene
| Gene Model ID | pfu_aug1.0_24194.1_47642 |
|---|---|
| Locus | scaffold24194.1 : 1 ... 15767 : + |
| To GenomeBrowser | scaffold24194.1:1..15767 |
| Genes list of scaffold | scaffold24194.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24194.1_47642.t1 | 1 | 1 | TPP_enzyme_C | 1 | 77 | 4.4e-10 | 39.3 | 3.2e-14 | 4.8e-10 | 39.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24194.1_47642.t1 | gi|260830363|ref|XP_002610130.1| | hypothetical protein BRAFLDRAFT_279682 [Branchiostoma floridae] | 9.0e-33 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_24194.1_47642.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24194.1_47642.t1 atacctgtgatatcagtggtgggtaacgatgcaggatggactcagatcgagagagaacaggccccgatgtttggtagcag tgtagcttgtaaacttgcctttaccgactacgagacggttgccgagggttatggtgggaagggactgagattagacagaa caaatgaagaccaaatcaaagaaatcctagaacaagctgtaaaactgaacaaagacgggaacagcgtgctcgttaattgt cttatcggaaaaaccaatttcagagagggtagcatatctgtatag |
|
Protein
| Protein ID | pfu_aug1.0_24194.1_47642.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24194.1_47642.t1 IPVISVVGNDAGWTQIEREQAPMFGSSVACKLAFTDYETVAEGYGGKGLRLDRTNEDQIKEILEQAVKLNKDGNSVLVNC LIGKTNFREGSISV |
|