Gene
| Gene Model ID | pfu_aug1.0_24279.1_40478 |
|---|---|
| Locus | scaffold24279.1 : 285 ... 8435 : - |
| To GenomeBrowser | scaffold24279.1:285..8435 |
| Genes list of scaffold | scaffold24279.1 |
| Synonym | pfu_aug2.0_2876.1_22220 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24279.1_40478.t1 | 2 | 1 | Iso_dh | 1 | 170 | 1.4013e-45 | 155.4 | 2.8026e-45 | 4.99997e-41 | 140.7 |
| pfu_aug1.0_24279.1_40478.t1 | 2 | 2 | Iso_dh | 170 | 197 | 1.4013e-45 | 155.4 | 7.5e-07 | 0.011 | 14.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24279.1_40478.t1 | gi|170577813|ref|XP_001894148.1| | isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, putative [Brugia malayi] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_24279.1_40478.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24279.1_40478.t1 atgatacctggagatggcattggtccagagatatctgcatcagtcaaagaaatattccgggcagcagatgcacctgtaga atgggaggatgttgatgtaacaccagttaaaggccctgatggaaactataagctccctgctaaaatatttgaatcaatgg gaaaaacaaaagttggactgaaggggccacttgagaccccagtgggaaaaggccacaggtccctcaatctagctcttaga aaggagttcaatttgtatgccaatgtgagaccatgtaaaagtattgaaggttatcagacagcgtatccatcagtagatct tgttactatcagagaaaatacagagggggagtattcaggcatagagcatgagttagccaagggattagtgcagagtgtaa agaaaatcacagagaaagcttcaatgagagttgctgagtatgcctttgcttatgctagagacaacaacagacacactgtg acagctgtacataaagctaatgtcattgacttgtgtgcaggtttgataggaggacttggagtaacaccaagtggaaatat cggtgaagacggagctatttttgagtcggtatga |
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Protein
| Protein ID | pfu_aug1.0_24279.1_40478.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24279.1_40478.t1 MIPGDGIGPEISASVKEIFRAADAPVEWEDVDVTPVKGPDGNYKLPAKIFESMGKTKVGLKGPLETPVGKGHRSLNLALR KEFNLYANVRPCKSIEGYQTAYPSVDLVTIRENTEGEYSGIEHELAKGLVQSVKKITEKASMRVAEYAFAYARDNNRHTV TAVHKANVIDLCAGLIGGLGVTPSGNIGEDGAIFESV |
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