Gene
| Gene Model ID | pfu_aug1.0_243510.1_14296 |
|---|---|
| Locus | scaffold243510.1 : 1 ... 641 : + |
| To GenomeBrowser | scaffold243510.1:1..641 |
| Genes list of scaffold | scaffold243510.1 |
| Synonym | pfu_aug2.0_353.1_10646 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_243510.1_14296.t1 | 1 | 1 | MFS_1 | 20 | 101 | 5.7e-07 | 28.5 | 4.3e-11 | 6.4e-07 | 28.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_243510.1_14296.t1 | gi|193083047|ref|NP_001122357.1| | vesicular glutamate transporter [Ciona intestinalis] | 1.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_243510.1_14296.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_243510.1_14296.t1 tctttctcccgaggaaaagcagatttacgaacaggagggacatcaagtttcagccagttctgtacaaaaggttaagtaca taccttggagagagatgctgacgtcacttcctctttctgccatattcgtggggaatttttgtcggaactgggtcttcgct atggttgtgacggaactaccacagtactatgctgatggctacaaaatagatattgcctcgataggttttctgacctccgt accagagatactgatgaccatagtagtggtggtagggggcatcgtctttgacaaactaataaaatcacagactattagta ccacaactgccagaaaagtggcacaatgtacag |
|
Protein
| Protein ID | pfu_aug1.0_243510.1_14296.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_243510.1_14296.t1 LSPEEKQIYEQEGHQVSASSVQKVKYIPWREMLTSLPLSAIFVGNFCRNWVFAMVVTELPQYYADGYKIDIASIGFLTSV PEILMTIVVVVGGIVFDKLIKSQTISTTTARKVAQCT |
|