Gene
| Gene Model ID | pfu_aug1.0_2437.1_22985 |
|---|---|
| Locus | scaffold2437.1 : 2208 ... 18145 : - |
| To GenomeBrowser | scaffold2437.1:2208..18145 |
| Genes list of scaffold | scaffold2437.1 |
| Synonym | pfu_aug2.0_366.1_20669 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2437.1_22985.t1 | 1 | 1 | tRNA-synt_2 | 1 | 164 | 5.0e-34 | 117.5 | 1.4e-37 | 5.3e-34 | 117.4 |
| pfu_aug1.0_2437.1_22985.t1 | 1 | 1 | GAD | 112 | 198 | 3.6e-15 | 55.8 | 2.0e-18 | 7.3e-15 | 54.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2437.1_22985.t1 | gi|224058910|ref|XP_002190760.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2437.1_22985.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2437.1_22985.t1 atggtcgggggtttagacagatatttccaaatagccaggtgttatcgtgatgaaagtatcaaaacagatagacaaccaga attcactcaggtagatatagagctttcttttaccactcaagaagaggtgcgacacctagtggaggaattgatcaatcaca gctggcctgtagacaaagggcagataactccaccattccctgttattacttatgaacaagccatgaatgactatgggatc gataaacctgacacgaggtttgatttaaagttagtagatatatctgaggagaccagagggagtggatttaagttatttga tgatatacttacaaaagagcatggaaaagttgtggcaatttgcctaccaaagacaaagggtgtattgtccaacaaagaaa tagaaactttaagaaattcaccattacatcatataaatttgaaaccagcgataataaaggttgataaaggtaaatgggaa tcgccattaagtaaacatctgtcagaagaggttaaagaaaaacttaacaagaagttacagataggagatggtgacttggt cttcatggcagctggagaaaattatacacctaatgagattttgggaaggctcaggttggaagctgctaaaatattggata aaaaagttaaaagttacatcaaatcttgtgatgtcgggccttaa |
|
Protein
| Protein ID | pfu_aug1.0_2437.1_22985.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2437.1_22985.t1 MVGGLDRYFQIARCYRDESIKTDRQPEFTQVDIELSFTTQEEVRHLVEELINHSWPVDKGQITPPFPVITYEQAMNDYGI DKPDTRFDLKLVDISEETRGSGFKLFDDILTKEHGKVVAICLPKTKGVLSNKEIETLRNSPLHHINLKPAIIKVDKGKWE SPLSKHLSEEVKEKLNKKLQIGDGDLVFMAAGENYTPNEILGRLRLEAAKILDKKVKSYIKSCDVGP |
|