Gene
| Gene Model ID | pfu_aug1.0_24381.1_33428 |
|---|---|
| Locus | scaffold24381.1 : 13407 ... 26145 : - |
| To GenomeBrowser | scaffold24381.1:13407..26145 |
| Genes list of scaffold | scaffold24381.1 |
| Synonym | pfu_aug2.0_11.1_03393 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24381.1_33428.t1 | 1 | 1 | Peptidase_C2 | 6 | 292 | 0.0 | 302.5 | 0.0 | 0.0 | 301.8 |
| pfu_aug1.0_24381.1_33428.t1 | 1 | 1 | Calpain_III | 303 | 361 | 4.1e-10 | 39.4 | 1.2e-13 | 9.2e-10 | 38.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_24381.1_33428.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24381.1_33428.t1 atgtctttattttaccaggaattgtgtaaagttccaaagttggtagttgagggagtgagctgtgatgatttgaatcaagg agagttgggaaacacatggtttgtaacagcatgttccagtcttactttagagaagaagcttttccaaacagtcgtaccag atataaaggaccaagaatgggacgaaagatccgagaagaacaaatatgctggcatatttcactttcggttctggagatac ggtgaatggatagacattgtaatagatgatagactgccaacaaaagatggaaaactgtgtttttgtcattcaaaatcaag aaatgaattttggtcggcgctcctagaaaaggcatacgccaaattatacggagattacgaatcacttcaaaatggtaaaa cagctgatgccatggtcgatttcacagggggcgtggcagaaaagatagagttatcgaaactgaatatgagagacgaagaa aacaaacttaaactttttggaaaaatgaaagaagccgtagaaaacaagtctttagttaactgcaatatacaatgtcagag aacagaagtcggaaaggaacttccacaaggtttaattcttgggcacggatacaacgtaacaaaagtattagatataaagg tggacaaaaagcaccaaggcgctgtaggaaactccatccttaaaatggtcagactgtctaatccatggggaacaaaggaa tggaatggtccgtgggctgatgattctccagaatggggtaaattgaataaaacagaatgggagaaactaggtcttaaatt ccagcaagaaggggaattctggatgaatttcgatgatttcttggcaaatttctccaatgtagacatatgtcactttgtga atacatccatcatttcgatatcaaagacctggagtgaggccatatttcacggagaatggacagtgtccggtcgtaatgga ggaggagacttccaatcggcgactttcttaagtaatccgcagtatcgttttgacattaatggtcccacggatcgtgtgat ggtgtcactagaacaacatgacatggacgttggacgtcagagtctcgagagcgagattccaaatttcacagacgtcacat cgaaatgttcatataaaacatga |
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Protein
| Protein ID | pfu_aug1.0_24381.1_33428.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24381.1_33428.t1 MSLFYQELCKVPKLVVEGVSCDDLNQGELGNTWFVTACSSLTLEKKLFQTVVPDIKDQEWDERSEKNKYAGIFHFRFWRY GEWIDIVIDDRLPTKDGKLCFCHSKSRNEFWSALLEKAYAKLYGDYESLQNGKTADAMVDFTGGVAEKIELSKLNMRDEE NKLKLFGKMKEAVENKSLVNCNIQCQRTEVGKELPQGLILGHGYNVTKVLDIKVDKKHQGAVGNSILKMVRLSNPWGTKE WNGPWADDSPEWGKLNKTEWEKLGLKFQQEGEFWMNFDDFLANFSNVDICHFVNTSIISISKTWSEAIFHGEWTVSGRNG GGDFQSATFLSNPQYRFDINGPTDRVMVSLEQHDMDVGRQSLESEIPNFTDVTSKCSYKT |
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