Gene
| Gene Model ID | pfu_aug1.0_24381.1_33429 |
|---|---|
| Locus | scaffold24381.1 : 31544 ... 34884 : - |
| To GenomeBrowser | scaffold24381.1:31544..34884 |
| Genes list of scaffold | scaffold24381.1 |
| Synonym | pfu_aug2.0_11.1_03394 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24381.1_33429.t1 | 1 | 1 | Carboxyl_trans | 1 | 148 | 3.00004e-41 | 141.3 | 2.8026e-45 | 3.59994e-41 | 141.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24381.1_33429.t1 | gi|332031387|gb|EGI70900.1| | Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Acromyrmex echinatior] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_24381.1_33429.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24381.1_33429.t1 atggttggtagggatgcagaggcaggggggatagctaaacatggagctaaaatggtcacagctgtagcttgtgctaaagt tccgaagttaactctgataataggaggatcatacggagcagggaattatgggatgtgtggtagggcatacagtcccaggt ttttgtacatgtggcctaatgcccgtgtatcagtgatgggaggggagcaggcagcaggtgtattagcacagattaccaga gaacaaagggccagggagggtaaaccttggacaccagaagaagaggaggcattaaaggcccctgttataaagaaatatga aaaagaaggtcatccatacttctccagtgcaaggttatgggatgatggtgtaatagatccagtggatacaagaactgtgt taggacttagtctgagtgccgcattaaatgctcctcgtcaaaggacacgctttggagtctttagaatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_24381.1_33429.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24381.1_33429.t1 MVGRDAEAGGIAKHGAKMVTAVACAKVPKLTLIIGGSYGAGNYGMCGRAYSPRFLYMWPNARVSVMGGEQAAGVLAQITR EQRAREGKPWTPEEEEALKAPVIKKYEKEGHPYFSSARLWDDGVIDPVDTRTVLGLSLSAALNAPRQRTRFGVFRM |
|