Gene
| Gene Model ID | pfu_aug1.0_2440.1_66324 |
|---|---|
| Locus | scaffold2440.1 : 10354 ... 18535 : - |
| To GenomeBrowser | scaffold2440.1:10354..18535 |
| Genes list of scaffold | scaffold2440.1 |
| Synonym | pfu_aug2.0_326.1_20605 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2440.1_66324.t1 | 1 | 1 | 7TM_GPCR_Srsx | 63 | 334 | 1.2e-07 | 31.1 | 1.3e-10 | 3.8e-07 | 29.5 |
| pfu_aug1.0_2440.1_66324.t1 | 1 | 1 | 7tm_1 | 69 | 354 | 5.7e-34 | 117.4 | 2.6e-37 | 7.6e-34 | 117.0 |
| pfu_aug1.0_2440.1_66324.t1 | 2 | 1 | 7TM_GPCR_Srv | 71 | 246 | 2.8e-07 | 29.9 | 9.4e-11 | 2.8e-07 | 29.9 |
| pfu_aug1.0_2440.1_66324.t1 | 2 | 2 | 7TM_GPCR_Srv | 315 | 322 | 2.8e-07 | 29.9 | 0.96 | 2900.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2440.1_66324.t1 | gi|348544911|ref|XP_003459924.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2440.1_66324.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2440.1_66324.t1 atgagtctgccattcgaactctctcagaatgtgttatctggccataattcagcagtctacacggacaacaactctgtctt tcctgaatatcgcagctccatgcaccaatcagaagatgcatctatgacgtcacatgacattaggaaaattggcctcgttt tgaaaatcttagcgattggtttgatcatgattatcgggacgttgggaaactttatcgtgattgtaactatagtgaaagac aaatatttacataggcctcctttctactatctgatcaacctatgtgtggcagatttgtcccgcgcggcgctctgtttgcc gtttgtgttagcctctgttgtgcagaactcgatttggacacacggacagacagtctgtacgttgatcggattcgctaaca cgctattcgttttcggttcagtagcttcactgttatcgatatcaatagatcgacatctagccgttgtgtattcagaattc catcgccggcgatctcagggtatggccattttaggagtaactctgctcatatggctcgtgtcattcgccatctcatttcc accagtttttggtgtagggacatacgagttcgttccggaagagtccttatgtgtcatcatccacaaagagtaccgtcaaa atgatacgttcggatttcttctggttttcactgctgttgtgtttggaactattctattctacattaggatatttctattc ctacgcgaacatcggaagatgagacccataatgcgacttccggcgcaaagtagtaactggaccttttttgggcccggaaa tggcatgattcaattgaacgttttaaatatccgcccgtttgctcctgcacagattccaacaatcagtcagaatctatctc aagctgatggaaccttaaacgtcaggacacacagaaacgagcaccttactcgtctgtttttcgtcattacaattctatac gactgcctttgggttttacatactgtccaatcatttgttgtaacatttaagggtacagattcgttttctgtgacgttcag gagtattacagcgtggttaacacgcaaatctccaatctcccatgcatgcgtccgatttcagttccgcttttcttaa |
|
Protein
| Protein ID | pfu_aug1.0_2440.1_66324.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2440.1_66324.t1 MSLPFELSQNVLSGHNSAVYTDNNSVFPEYRSSMHQSEDASMTSHDIRKIGLVLKILAIGLIMIIGTLGNFIVIVTIVKD KYLHRPPFYYLINLCVADLSRAALCLPFVLASVVQNSIWTHGQTVCTLIGFANTLFVFGSVASLLSISIDRHLAVVYSEF HRRRSQGMAILGVTLLIWLVSFAISFPPVFGVGTYEFVPEESLCVIIHKEYRQNDTFGFLLVFTAVVFGTILFYIRIFLF LREHRKMRPIMRLPAQSSNWTFFGPGNGMIQLNVLNIRPFAPAQIPTISQNLSQADGTLNVRTHRNEHLTRLFFVITILY DCLWVLHTVQSFVVTFKGTDSFSVTFRSITAWLTRKSPISHACVRFQFRFS |
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