Gene
| Gene Model ID | pfu_aug1.0_24492.1_62310 |
|---|---|
| Locus | scaffold24492.1 : 12366 ... 21778 : + |
| To GenomeBrowser | scaffold24492.1:12366..21778 |
| Genes list of scaffold | scaffold24492.1 |
| Synonym | pfu_aug2.0_7843.1_12955 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24492.1_62310.t1 | 2 | 1 | Cobalamin_bind | 8 | 50 | 1.2e-20 | 73.4 | 0.078 | 290.0 | -0.2 |
| pfu_aug1.0_24492.1_62310.t1 | 2 | 2 | Cobalamin_bind | 55 | 249 | 1.2e-20 | 73.4 | 7.0e-24 | 2.6e-20 | 72.3 |
Transcript
| Transcript ID | pfu_aug1.0_24492.1_62310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24492.1_62310.t1 atgtggccacaaggacagagtgctgacgctgtgttagccctggggcttggcaaaatggacgaattcaacaaagacagctg tgaattcagattggccataaaaagtgctgaatttgatattctatcagcaatgcttgcaaatggtaacctcaatgatgcaa catggggtagaggtgttcttgccaaatacatagtagctctgcgcacggcatgtgttgatgttgcaatgttccataataac aataacctgcttactatgttgcaaacccaatacaacacctacaagaattactatgacggtgatagacgtgccttgtcttg gtacgctctggccaggtgtaccgctggagaggcagtggggagtgatattgtaaccagacttactgccaccccaggaactt acagcatgggagtagaggaggcagccatggtggccattgcactgtcttgtatggattatatgaacatgacaatgtacgga acagaaataatggccgcccacgactacatcatagcacaacaacgctctgacggaacatttggtaatgagttcgagactgc ccttgcacttcaggctttgaaaaactcaaatgtcacaaacctgagaatgattcaagacaaagccttggaatatctttcta ctctcattcaagatacctataatgggcagtacaagaatctagcagctgcaagtcacattatgacggctctagcaggaaaa tcttttgctgatgccaaaatggattgccctgagatgatgacgacaacgcccgctccaggacaggcaatacaaatcactat cagagttcgtggtggagtgattaacagctccatcagtcaggattacatgataaccattcgtaggggaaacagtctatacc aggcattacnaattactacaaatacaacagtcctcttttatgtttactgctgtgaatacagctag |
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Protein
| Protein ID | pfu_aug1.0_24492.1_62310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24492.1_62310.t1 MWPQGQSADAVLALGLGKMDEFNKDSCEFRLAIKSAEFDILSAMLANGNLNDATWGRGVLAKYIVALRTACVDVAMFHNN NNLLTMLQTQYNTYKNYYDGDRRALSWYALARCTAGEAVGSDIVTRLTATPGTYSMGVEEAAMVAIALSCMDYMNMTMYG TEIMAAHDYIIAQQRSDGTFGNEFETALALQALKNSNVTNLRMIQDKALEYLSTLIQDTYNGQYKNLAAASHIMTALAGK SFADAKMDCPEMMTTTPAPGQAIQITIRVRGGVINSSISQDYMITIRRGNSLYQALXITTNTTVLFYVYCCEYS |
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