Gene
| Gene Model ID | pfu_aug1.0_2454.1_37277 |
|---|---|
| Locus | scaffold2454.1 : 50506 ... 61665 : + |
| To GenomeBrowser | scaffold2454.1:50506..61665 |
| Genes list of scaffold | scaffold2454.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2454.1_37277.t1 | 5 | 1 | Ank_2 | 41 | 65 | 0.0 | 192.7 | 0.57 | 1700.0 | -0.6 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 1 | Ank_4 | 41 | 53 | 3.3e-27 | 94.3 | 0.92 | 2700.0 | -1.0 |
| pfu_aug1.0_2454.1_37277.t1 | 5 | 2 | Ank_2 | 42 | 148 | 0.0 | 192.7 | 8.9e-21 | 2.6e-17 | 62.9 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 1 | Ank_3 | 42 | 54 | 8.7e-29 | 96.7 | 0.92 | 2700.0 | -0.9 |
| pfu_aug1.0_2454.1_37277.t1 | 4 | 1 | Ank_5 | 86 | 122 | 1.5e-19 | 69.5 | 9.6e-06 | 0.029 | 14.6 |
| pfu_aug1.0_2454.1_37277.t1 | 5 | 1 | Ank | 87 | 117 | 2.8e-36 | 121.5 | 6.6e-10 | 2.0e-06 | 27.3 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 2 | Ank_3 | 87 | 114 | 8.7e-29 | 96.7 | 2.9e-07 | 0.00087 | 19.3 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 2 | Ank_4 | 87 | 139 | 3.3e-27 | 94.3 | 1.1e-14 | 3.3e-11 | 43.3 |
| pfu_aug1.0_2454.1_37277.t1 | 5 | 3 | Ank_2 | 90 | 182 | 0.0 | 192.7 | 1.2e-30 | 3.6e-27 | 94.5 |
| pfu_aug1.0_2454.1_37277.t1 | 4 | 2 | Ank_5 | 105 | 156 | 1.5e-19 | 69.5 | 4.5e-15 | 1.3e-11 | 44.2 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 3 | Ank_3 | 118 | 146 | 8.7e-29 | 96.7 | 2.9e-10 | 8.6e-07 | 28.6 |
| pfu_aug1.0_2454.1_37277.t1 | 5 | 2 | Ank | 120 | 149 | 2.8e-36 | 121.5 | 2.8e-13 | 8.2e-10 | 37.9 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 3 | Ank_4 | 121 | 169 | 3.3e-27 | 94.3 | 3.8e-12 | 1.1e-08 | 35.3 |
| pfu_aug1.0_2454.1_37277.t1 | 5 | 4 | Ank_2 | 149 | 193 | 0.0 | 192.7 | 1.9e-11 | 5.7e-08 | 33.0 |
| pfu_aug1.0_2454.1_37277.t1 | 4 | 3 | Ank_5 | 151 | 189 | 1.5e-19 | 69.5 | 1.8e-08 | 5.3e-05 | 23.3 |
| pfu_aug1.0_2454.1_37277.t1 | 5 | 3 | Ank | 152 | 182 | 2.8e-36 | 121.5 | 1.6e-12 | 4.6e-09 | 35.6 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 4 | Ank_3 | 152 | 179 | 8.7e-29 | 96.7 | 1.4e-08 | 4.2e-05 | 23.3 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 4 | Ank_4 | 152 | 190 | 3.3e-27 | 94.3 | 9.8e-09 | 2.9e-05 | 24.4 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 5 | Ank_3 | 201 | 219 | 8.7e-29 | 96.7 | 0.62 | 1900.0 | -0.3 |
| pfu_aug1.0_2454.1_37277.t1 | 5 | 4 | Ank | 204 | 222 | 2.8e-36 | 121.5 | 0.03 | 89.0 | 3.1 |
| pfu_aug1.0_2454.1_37277.t1 | 5 | 5 | Ank_2 | 205 | 252 | 0.0 | 192.7 | 3.0e-09 | 9.0e-06 | 25.9 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 5 | Ank_4 | 205 | 245 | 3.3e-27 | 94.3 | 0.0037 | 11.0 | 6.6 |
| pfu_aug1.0_2454.1_37277.t1 | 5 | 5 | Ank | 227 | 252 | 2.8e-36 | 121.5 | 1.0e-06 | 0.0031 | 17.2 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 6 | Ank_3 | 227 | 253 | 8.7e-29 | 96.7 | 4.3e-07 | 0.0013 | 18.8 |
| pfu_aug1.0_2454.1_37277.t1 | 4 | 4 | Ank_5 | 227 | 252 | 1.5e-19 | 69.5 | 0.017 | 52.0 | 4.2 |
| pfu_aug1.0_2454.1_37277.t1 | 6 | 6 | Ank_4 | 237 | 253 | 3.3e-27 | 94.3 | 0.0029 | 8.5 | 7.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2454.1_37277.t1 | gi|123468446|ref|XP_001317441.1| | hypothetical protein [Trichomonas vaginalis G3] | 7.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2454.1_37277.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2454.1_37277.t1 atgcgggggaatctacaggcggcgccaacgaccagtaacgacgatggcccatcagagggcagcagcaaaccaataccatc agacagtgtttttatccaaattccgacggatgaaccgacgctgataaaagctacacgatataacgacatacagatgattg acaggtcgtcccgagaaggacaagacatgaattgtatatatgatggtgaatatgttgtacagagtaacagacttttccgg aacatacggttgataaaatattctgctttacacgtagcatgtatacactcagagctcaagactgtagagtgtcttttaga taacaatgctgacataaacatctgtgatgataacaagcgcacacctctacactgtgccgccacctcgaatagagctgatg tcgttgacctcctcctcgctcgaggagcggatgtcaatgtgcagatgaagagtggcaggacacctctaatggaagcagtt caagccggaagtcttcctatcgtccgatcgttgatacagcactgcgcagacgtgaacttgagagacaccaagggcacttc cgcattattcatgactgttttgtcaactgtgaatagaaatcgtcagcttggtgtggatatttgtgcacagttgataaaag gcggagctaaagtagacgaagagaacgccatgcatgctacgccaatgatgatggccacaggaatccgtaatatacctctt gtcaaattctttataagtcatggagcagacatcaaccat |
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Protein
| Protein ID | pfu_aug1.0_2454.1_37277.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2454.1_37277.t1 MRGNLQAAPTTSNDDGPSEGSSKPIPSDSVFIQIPTDEPTLIKATRYNDIQMIDRSSREGQDMNCIYDGEYVVQSNRLFR NIRLIKYSALHVACIHSELKTVECLLDNNADINICDDNKRTPLHCAATSNRADVVDLLLARGADVNVQMKSGRTPLMEAV QAGSLPIVRSLIQHCADVNLRDTKGTSALFMTVLSTVNRNRQLGVDICAQLIKGGAKVDEENAMHATPMMMATGIRNIPL VKFFISHGADINH |
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