Gene
| Gene Model ID | pfu_aug1.0_245498.1_50234 |
|---|---|
| Locus | scaffold245498.1 : 10 ... 636 : - |
| To GenomeBrowser | scaffold245498.1:10..636 |
| Genes list of scaffold | scaffold245498.1 |
| Synonym | NA |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | paramyosin |
| Description | Paramyosin partial sequence. BLASTP top hit to AJ547618 (Crassostrea gigas). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_245498.1_50234.t1 | 1 | 1 | Myosin_tail_1 | 1 | 37 | 5.6e-08 | 31.0 | 1.3e-11 | 6.3e-08 | 30.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_245498.1_50234.t1 | gi|29119645|emb|CAD79338.1| | paramyosin protein [Crassostrea gigas] | 8.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_245498.1_50234.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_245498.1_50234.t1 gaagatgtagccagccttaccatgaacaaataccgcaaagctcagcaactcatcgaggaagctgaacaccgcgccgacaa cgccgagaagaacctggccgctgtacgccgaacccgatctatgtccgtgtcaagggagatcaccaaagttgtcagggtat aa |
|
Protein
| Protein ID | pfu_aug1.0_245498.1_50234.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_245498.1_50234.t1 EDVASLTMNKYRKAQQLIEEAEHRADNAEKNLAAVRRTRSMSVSREITKVVRV |
|