Gene
Gene Model ID | pfu_aug1.0_245498.1_50234 |
---|---|
Locus | scaffold245498.1 : 10 ... 636 : - |
To GenomeBrowser | scaffold245498.1:10..636 |
Genes list of scaffold | scaffold245498.1 |
Synonym | NA |
Manual annotation
Study field | structural proteins |
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Gene name | paramyosin |
Description | Paramyosin partial sequence. BLASTP top hit to AJ547618 (Crassostrea gigas). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_245498.1_50234.t1 | 1 | 1 | Myosin_tail_1 | 1 | 37 | 5.6e-08 | 31.0 | 1.3e-11 | 6.3e-08 | 30.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_245498.1_50234.t1 | gi|29119645|emb|CAD79338.1| | paramyosin protein [Crassostrea gigas] | 8.0e-19 |
Transcript
Transcript ID | pfu_aug1.0_245498.1_50234.t1 |
---|---|
Definition | - |
>pfu_aug1.0_245498.1_50234.t1 gaagatgtagccagccttaccatgaacaaataccgcaaagctcagcaactcatcgaggaagctgaacaccgcgccgacaa cgccgagaagaacctggccgctgtacgccgaacccgatctatgtccgtgtcaagggagatcaccaaagttgtcagggtat aa |
Protein
Protein ID | pfu_aug1.0_245498.1_50234.t1 |
---|---|
Definition | - |
>pfu_aug1.0_245498.1_50234.t1 EDVASLTMNKYRKAQQLIEEAEHRADNAEKNLAAVRRTRSMSVSREITKVVRV |