Gene
| Gene Model ID | pfu_aug1.0_2464.1_51676 |
|---|---|
| Locus | scaffold2464.1 : 30466 ... 32957 : + |
| To GenomeBrowser | scaffold2464.1:30466..32957 |
| Genes list of scaffold | scaffold2464.1 |
| Synonym | pfu_aug2.0_68.1_26800 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2464.1_51676.t1 | 6 | 1 | Cadherin | 2 | 73 | 0.0 | 246.7 | 2.3e-12 | 6.8e-09 | 35.8 |
| pfu_aug1.0_2464.1_51676.t1 | 6 | 2 | Cadherin | 88 | 181 | 0.0 | 246.7 | 1.8e-13 | 5.4e-10 | 39.3 |
| pfu_aug1.0_2464.1_51676.t1 | 6 | 3 | Cadherin | 205 | 294 | 0.0 | 246.7 | 6.4e-10 | 1.9e-06 | 28.0 |
| pfu_aug1.0_2464.1_51676.t1 | 6 | 4 | Cadherin | 308 | 397 | 0.0 | 246.7 | 3.2e-20 | 9.4e-17 | 61.0 |
| pfu_aug1.0_2464.1_51676.t1 | 6 | 5 | Cadherin | 416 | 502 | 0.0 | 246.7 | 6.1e-16 | 1.8e-12 | 47.3 |
| pfu_aug1.0_2464.1_51676.t1 | 6 | 6 | Cadherin | 528 | 611 | 0.0 | 246.7 | 2.5e-14 | 7.3e-11 | 42.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2464.1_51676.t1 | gi|224097337|ref|XP_002191035.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2464.1_51676.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2464.1_51676.t1 atgggaccaaataattcgatcaaagaatatgtactgattccaaacacgggaatgtttgctttagacatacatccgaagat tgacggaacttccgatctaagtctccgtctgattcagacactagaccgcgaggacaaggaccgttacacgatttacgtca aggcgaaagatggcggcaatcccccgaaatcaggaacattgatcgtgaatatttcagtatcggacgtcaatgataatgcg ccagttttcacacaggatctttacaacatcacaattcaagaggacataccattgaataccgttattacccgagtttcagc gaacgatgccgacaccgggaaaaatgcggaagtgacgtatcgattcagcgttcgccaaacggatgacatatctatctatg gaatatcacagacatccggtgaaattagcgtcattggtcaaccagagtacgagccaaacaaaccgttttatagaatcgtc gtggaggcatcggacagtgggactatagtgagaaaaagctcccaagtagaagtctttgtttacataaatgatacaaataa caatgctccgcaaataacgataaacttgctctctaatggtcaagattttgctgttattaaggagaacgctaacatcggtg acgtcacagcccacattgacgtcaaagacgaggatatgggcattaatggactcgtgaactgtacgttaaacaacaagtat tttcgattgcaacaattatcgaatgtgtcaaacgaatataaagtcgtcgtgaaaagtgaaattgatcgagaagagaaaat cgaacacgtgattacaatacattgtcacgatggcggcactccgtctttgaactcttcggcaagtttcattgttcaagttc aagatgaaaatgacaatgctccgacttttaccaacagagtgtacgtggcacaaatagacgaaaataaaccagcacagagc atcgttgtcaaagtcagtgccacagaccctgaccaaagtccgaatggtcaagtcaggtattacttgggtccggaagccca gtttgactttacaatcaatccaacagatggaatcatacggacaaaaaccgtgttcgacagagaaatgcaaagtagtatca atttcactgttttggctgtggatggcggaagtccggttactctgaccggaactgcaactatacagctgcgcattaacgat gaaaacgacgtcacgccaactttcaataaatctcactgggagtttatcgttaaagaggagttaaatactacctcgatagg attcataaaagcttacgacctggatgcaggggataatggaagaataacattttacatgaaaatcgaagacctggcacgag taccttttgatataacgccgtatggagaaatccatagaacggcacgtctagacagagaacagaaagacaggtatcagttt gacgtcattgctcgtgacaatggtgtacacacgaggagtaattccacacaagtgactgttataattgaagacgtcaatga caatgcccctaagtttgtgtttcctgatgcctataacagtacagtgacgatactatacacggctttagagaatagcctgg tcacaacgctttcggcaaccgatatagattacgctgaaaatgccgagattacgtacggtattatcggtggtaacggtgat gggattttcaagattgataaattttcgggagagattttgctggctcggaaaatagggaagaacgagataaaaatttacga cctcatagtgactgccgaggacaatggtcttcaagaacaaagactgacacgtcatcctctctctgtgcatgtcaaatttg ttaacgtcacagctatttcgtcacttccggtagaggagcatccgcaaaatttgatcatcgccattgtgatagctgcctta acagtgataatttctgttgcaataatttcggttatatgcatcatacgaaggattgacatgcgcaaacataattatcccgc caaaaatatagaagaaatgaagattatggagaatatggcgagaaacaacagtaacagatcgtcatcctccaaagggtcac gtgaacaaatggtgccgtctgtgatttacaaaaacgggaagaaggaagtgagtttttccctcgatgaagatgatacaaac atttcttattccttcccctccacgttgtctgatacaaatcccagcatgatcacctttaaatccacaagtccactgactgt acaggttggtatttataatataaatt |
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Protein
| Protein ID | pfu_aug1.0_2464.1_51676.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2464.1_51676.t1 MGPNNSIKEYVLIPNTGMFALDIHPKIDGTSDLSLRLIQTLDREDKDRYTIYVKAKDGGNPPKSGTLIVNISVSDVNDNA PVFTQDLYNITIQEDIPLNTVITRVSANDADTGKNAEVTYRFSVRQTDDISIYGISQTSGEISVIGQPEYEPNKPFYRIV VEASDSGTIVRKSSQVEVFVYINDTNNNAPQITINLLSNGQDFAVIKENANIGDVTAHIDVKDEDMGINGLVNCTLNNKY FRLQQLSNVSNEYKVVVKSEIDREEKIEHVITIHCHDGGTPSLNSSASFIVQVQDENDNAPTFTNRVYVAQIDENKPAQS IVVKVSATDPDQSPNGQVRYYLGPEAQFDFTINPTDGIIRTKTVFDREMQSSINFTVLAVDGGSPVTLTGTATIQLRIND ENDVTPTFNKSHWEFIVKEELNTTSIGFIKAYDLDAGDNGRITFYMKIEDLARVPFDITPYGEIHRTARLDREQKDRYQF DVIARDNGVHTRSNSTQVTVIIEDVNDNAPKFVFPDAYNSTVTILYTALENSLVTTLSATDIDYAENAEITYGIIGGNGD GIFKIDKFSGEILLARKIGKNEIKIYDLIVTAEDNGLQEQRLTRHPLSVHVKFVNVTAISSLPVEEHPQNLIIAIVIAAL TVIISVAIISVICIIRRIDMRKHNYPAKNIEEMKIMENMARNNSNRSSSSKGSREQMVPSVIYKNGKKEVSFSLDEDDTN ISYSFPSTLSDTNPSMITFKSTSPLTVQVGIYNIN |
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