Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_24723.1_04395
Locus scaffold24723.1 : 1 ... 11057 : +
To GenomeBrowser scaffold24723.1:1..11057
Genes list of scaffold scaffold24723.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_24723.1_04395.t1 1 1 Lectin_C 47 139 2.2e-07 31.4 2.3e-11 3.4e-07 30.8

Transcript
Transcript IDpfu_aug1.0_24723.1_04395.t1
Definition-
>pfu_aug1.0_24723.1_04395.t1
atcgtctttgaagacaaagggaaccattatattttgattgatgatattatggtgtataacgtcggctgtaatagtccagg
tattattttcagccacggagacgatcaacgacactttgctatttggatggacctggcagcggcggcagatttcggactat
ggacacgtggtaatgacattgataaagagggaaactttgtatgggcggagaatcacgggcaaccaaaggcattctcctac
aggtcagataacgttattgataattttcgggcaaagtgtataccgaatagcaactggcgctctgggcagcctaacaatat
aggtgacgatcaagactgtgttcttctccaatacccccttactggactcaagtggtctgacgtcaactgctcggagaaac
actcattcatctgtgaagctgcatacagtcatgtgacaggacattcttccataggaaatcctttcggttaa

Protein
Protein IDpfu_aug1.0_24723.1_04395.t1
Definition-
>pfu_aug1.0_24723.1_04395.t1
IVFEDKGNHYILIDDIMVYNVGCNSPGIIFSHGDDQRHFAIWMDLAAAADFGLWTRGNDIDKEGNFVWAENHGQPKAFSY
RSDNVIDNFRAKCIPNSNWRSGQPNNIGDDQDCVLLQYPLTGLKWSDVNCSEKHSFICEAAYSHVTGHSSIGNPFG

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