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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2475.1_37283
Locus scaffold2475.1 : 15078 ... 17445 : -
To GenomeBrowser scaffold2475.1:15078..17445
Genes list of scaffold scaffold2475.1
Synonym pfu_aug2.0_1420.1_01615

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2475.1_37283.t1 1 1 AMP-binding 32 135 5.8e-10 38.1 4.4e-14 6.5e-10 37.9

Transcript
Transcript IDpfu_aug1.0_2475.1_37283.t1
Definition-
>pfu_aug1.0_2475.1_37283.t1
atgtttaaaagtaacgcaaagaaaagaagttatttatgtacgccatggaaactagatacactgttctgtaccgtcccaga
tcggttacagttgatggcagagatgaacccggacaaagaagttataatttttgttggagaaaaggaaagagtgggtgtga
cctatagggacattgtagatggagcctcaagtattgcgaggaaaatggtgacgataggcatacagaagaatgaaattgtt
gctattcatgatgataagtctacttcctggttgtataatgcaatcggagcacagatgtgtggagcatggcctcttcatat
ttcctttaatcgtagagatggctcagatgtcgctgacgttctgaaaaggagtagttgtaagactgtcattacacaaccgg
gggatgatgacgaatacatccatatcatgaaaaacttcgttcattttaatgatgatggaactatatcaagtaaggatgtt
ccttgtttgaatcgaattattttctcaaagaagccagcttgtttacataattctataactttggatatattttgccgagt
gcaaagagtgatttaccagaaatag

Protein
Protein IDpfu_aug1.0_2475.1_37283.t1
Definition-
>pfu_aug1.0_2475.1_37283.t1
MFKSNAKKRSYLCTPWKLDTLFCTVPDRLQLMAEMNPDKEVIIFVGEKERVGVTYRDIVDGASSIARKMVTIGIQKNEIV
AIHDDKSTSWLYNAIGAQMCGAWPLHISFNRRDGSDVADVLKRSSCKTVITQPGDDDEYIHIMKNFVHFNDDGTISSKDV
PCLNRIIFSKKPACLHNSITLDIFCRVQRVIYQK

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