Gene
| Gene Model ID | pfu_aug1.0_24760.1_11643 |
|---|---|
| Locus | scaffold24760.1 : 1 ... 11517 : + |
| To GenomeBrowser | scaffold24760.1:1..11517 |
| Genes list of scaffold | scaffold24760.1 |
| Synonym | pfu_aug2.0_870.1_01214 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24760.1_11643.t1 | 1 | 1 | Ribosomal_S26e | 1 | 104 | 0.0 | 172.5 | 0.0 | 0.0 | 172.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24760.1_11643.t1 | gi|133893|sp|P27085.1|RS26_OCTVU | 40S ribosomal protein S26 [Octopus vulgaris] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_24760.1_11643.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24760.1_11643.t1 actcagaaaaggcgtaacaatgggcggagtaaaaatgggcgtggtcacgtgaagtttgtgagatgtacaaactgtgcccg ctgtgtgcctaaagacaaggctatcaagaagtttgtgattaggaacattgttgaagctgccgctgtcagggatatctctg atgctagtgtatatgatgtatatgccctgcccaagctatatgccaagttattttactgtgtctcctgtgctatccactcc aaggtagtaagaaacagatccaaggaggcacgaaaggatagatcaccccctctgaggttccgaccaatcagagatggtgc tgcaccaaggaccggaggtcaaggtggtggccctccgccagctcgttcataa |
|
Protein
| Protein ID | pfu_aug1.0_24760.1_11643.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24760.1_11643.t1 TQKRRNNGRSKNGRGHVKFVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYDVYALPKLYAKLFYCVSCAIHS KVVRNRSKEARKDRSPPLRFRPIRDGAAPRTGGQGGGPPPARS |
|