Gene
| Gene Model ID | pfu_aug1.0_2480.1_30121 |
|---|---|
| Locus | scaffold2480.1 : 516 ... 37090 : + |
| To GenomeBrowser | scaffold2480.1:516..37090 |
| Genes list of scaffold | scaffold2480.1 |
| Synonym | pfu_aug2.0_219.1_30440 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2480.1_30121.t1 | 1 | 1 | cNMP_binding | 387 | 490 | 2.6e-21 | 75.2 | 3.3e-25 | 4.8e-21 | 74.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2480.1_30121.t1 | gi|291221843|ref|XP_002730929.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2480.1_30121.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2480.1_30121.t1 atgcatcggatgcagcatctgacctacattttccggttgtttgactttgtcaatgtctggttaaagtttttgggaaactg tgcaacatctattgaggaaaaaattatacgaaaaaaattaaaaaggaaaaagtcaagggtgttcaacgatgctatggtgg agattaccatcacactcgcctccacttatctcacttactacataggtgctggttcatgtgtctggtatagtgtttctgac attactggtcaatgctacaacctcatcaagtctactcagattattagatttctagctgatgctgagtgggacagtgtaga gaaggaaacagagataattgacccgtacaagacaacagaggaggaggcccagatagacgagtcgttagacatacgtccaa actctatctgtccagagtgtgactgtaagctacctgcacagcatacacgtaaagaactcagggatatgactaatgaagct attttacgtatgctcaaagctgaaaagatgagttactggaggcagtttgagcagggtatgttatctagggaagctgtcag aaaactacaggattgtactgatgtctctgctgacaaaaaaggaaaattcattgatgttgatgaaattaagaagagttggg aaattccaatgatttatgaaaaaatgcccttgatgcctgtgttcatgaggcttatcaactacttgatgagtaaacaactg agctatggttatgatgtgggtagggggtatgtagctggggaggaggaggtcattaagcttatagaccacatggtggatca gaaagacatagctagaacactaaaacaggctagtgataatggacggcttgatgtcatcagatgtttaggtatgttgacaa agcagcatccagatatagcattgtcaatcaagactcggcaggcaatcaggagtgtactaaacaatctccgtgacggaatc cacgagctgttgatggacggaatactggaggaggcagagggtcacaaactagagaagatggtagaggagaagatgaagcg gttattgaatgcagcaccaagtctaccattacctccaccagacaagatgttaaaccatgtcttctggttgaggaacgacc ccaaacttatatcttacattaaggaaaaagccaaactgattacatataactatgaggatgttattatacatgaaggagat cctcctggtggtatatatatcattgtatcaggaatggtcaggttggagtctacatcacaacctggtaagccaattatatt ggaggacaagccgtcaggatctgaacttcacgtcaaggccaatctcatagacttcctcacggcaggaaacgtcctgggag agatgggacttctgacgaaacgaccaagatctgccactgtaacttgtgaaacagcagtacaggtgctagtaataagccaa gatgacatggaaacagctctaaaggaattcaacgacagtgaaccttccttggagtatagattatggcatgtgtgtgctaa ccgtatagctacatcagtactgatgaaacaaccatcttaccagggctggactaaggagaaaatcaagttacgtttagaga attcctacttgtttgacgcagaggaatctgacgttttcaccgtggatgccaccatgagtgatgtagtactggtcaatgga tatgcagagaatgcctttaccaaagatcaatttactgggccatgctatattccttggtccgttcttaaactacaattaca ggcgatgagaccaaagttcctaaaatcacatcataagcatgtaccaatatcggatgatgatgaacaggaatacttaactg ccattggcgaaatagacggcagcaaccccaacgctatagaggatatcgactatgtgcgaatagaaaaggacatgacaaag gttccagtacaacaggaatttaactattaa |
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Protein
| Protein ID | pfu_aug1.0_2480.1_30121.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2480.1_30121.t1 MHRMQHLTYIFRLFDFVNVWLKFLGNCATSIEEKIIRKKLKRKKSRVFNDAMVEITITLASTYLTYYIGAGSCVWYSVSD ITGQCYNLIKSTQIIRFLADAEWDSVEKETEIIDPYKTTEEEAQIDESLDIRPNSICPECDCKLPAQHTRKELRDMTNEA ILRMLKAEKMSYWRQFEQGMLSREAVRKLQDCTDVSADKKGKFIDVDEIKKSWEIPMIYEKMPLMPVFMRLINYLMSKQL SYGYDVGRGYVAGEEEVIKLIDHMVDQKDIARTLKQASDNGRLDVIRCLGMLTKQHPDIALSIKTRQAIRSVLNNLRDGI HELLMDGILEEAEGHKLEKMVEEKMKRLLNAAPSLPLPPPDKMLNHVFWLRNDPKLISYIKEKAKLITYNYEDVIIHEGD PPGGIYIIVSGMVRLESTSQPGKPIILEDKPSGSELHVKANLIDFLTAGNVLGEMGLLTKRPRSATVTCETAVQVLVISQ DDMETALKEFNDSEPSLEYRLWHVCANRIATSVLMKQPSYQGWTKEKIKLRLENSYLFDAEESDVFTVDATMSDVVLVNG YAENAFTKDQFTGPCYIPWSVLKLQLQAMRPKFLKSHHKHVPISDDDEQEYLTAIGEIDGSNPNAIEDIDYVRIEKDMTK VPVQQEFNY |
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