Gene
| Gene Model ID | pfu_aug1.0_24801.1_19033 |
|---|---|
| Locus | scaffold24801.1 : 1446 ... 4380 : + |
| To GenomeBrowser | scaffold24801.1:1446..4380 |
| Genes list of scaffold | scaffold24801.1 |
| Synonym | pfu_aug2.0_1108.1_28058 |
Manual annotation
| Study field | Transcription Factors |
|---|---|
| Gene name | Pfu-PTFa1 |
| Description | Best hit to AAI01137 Fer3-like (Drosophila) [Homo sapiens] with 7e-25 by a BLASTP search against NCBI Homo sapiens nr database. This annotation is based on NJ, ML, and BI. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24801.1_19033.t1 | 1 | 1 | HLH | 104 | 155 | 1.4e-15 | 56.7 | 6.2e-19 | 3.1e-15 | 55.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24801.1_19033.t1 | gi|242007238|ref|XP_002424449.1| | protein lin-32, putative [Pediculus humanus corporis] | 6.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_24801.1_19033.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24801.1_19033.t1 atgggtacagattatctatctgaatttcaatcttttcaaaccggtgattttaatgagctgctggaatatacagcctttct atttaacgaagagacgggagaaagcagctcatctaactttgaagcatgtctggcggaggagacgacctttgaaaggattc cgcaataccatgagtctgtgagaccagagttaatgacactgaggacagcaaccaataataaccaagaagaaagagaaaca gccaatcaagtatcgagaacttgtgctgaaaatttgaaaccgaaaaggaagcgagatcaaacagtatcacaacgaaaagc tgccaacgtaagagaacggaggcggatggtgacgttgaataaagcctttgacgatctgagaaaaagactcccagctttcg actacgaaaagaaactgtcaagaatagacactctaagactagcaatcacgtatatatcttttatgaaggggttagaaatg gaaaatccgaaaaatcagaactga |
|
Protein
| Protein ID | pfu_aug1.0_24801.1_19033.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24801.1_19033.t1 MGTDYLSEFQSFQTGDFNELLEYTAFLFNEETGESSSSNFEACLAEETTFERIPQYHESVRPELMTLRTATNNNQEERET ANQVSRTCAENLKPKRKRDQTVSQRKAANVRERRRMVTLNKAFDDLRKRLPAFDYEKKLSRIDTLRLAITYISFMKGLEM ENPKNQN |
|