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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2488.1_30130
Locus scaffold2488.1 : 13126 ... 15232 : +
To GenomeBrowser scaffold2488.1:13126..15232
Genes list of scaffold scaffold2488.1
Synonym pfu_aug2.0_970.1_01289

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2488.1_30130.t1 1 1 Gal-3-0_sulfotr 126 407 0.0 168.9 0.0 0.0 168.4

Transcript
Transcript IDpfu_aug1.0_2488.1_30130.t1
Definition-
>pfu_aug1.0_2488.1_30130.t1
atgctggacctgtatgatacaaacctcaattggagatcaaacaagaaatatgaggagactagcattaagatgaatgtccc
actgctgagagataaacctggtaccaagcaatggaattcgtccgaatatattagacttaaagacaaactgtatcaaaatg
tcggacctacagacaaactctatcaacgtgttggactttcagacaaactctatcaacatgttgcacctacagacaaactc
tatcaacgtgttggacctacagacaaactctatcaacatgttggacctacagacaaactctatcaacgtgttggacttac
agacaaactgaatcacgttagaaggaacatatctgatggcgctaaagacactgtatcttcaagagtaaataatgtcgtat
ttttgaaactgcataaatctgcaagtacaacagtacagaacattttcttgagatatggtttctttcgtaatttgtccttt
gtgctcccaagacctccgggatattattggcggaacgtaataagtctgaacgatacagtgacgaaacgaaatattcttcc
gccaccaaaaaataggacgttcaatattctctgtagtcacgtgatctataacagaacagtcttccgacctctgatgccac
aaaataccaaattcataggtattataagggaaccacgggcgcagtttatgtctacactgaaatatattcgaccgcacgaa
gtgttcgatagtggtggtgacccactcgaaaattactttaaaaatccacgtcgatacgaatcattggatccgcgacagtc
cttaacaaacaacagaatggcggtggaatttgggtttcccctgaaactgtttcaaaccagaaatagtagtgaaattcagc
aatatattcagaaacttaataaagaatttgacttagtcatccttgttgaaaaaattgatgaatcgttgattttaatgaaa
agaattctacgatggaacataagggatattatctacattacccaaaataagaatgagaaaaaggatagcagatttaattg
gactaacgaaacagaaagacgatttcatgcatggaattatatagacattgaattatataactattttaagaccaaaatgt
atcagcgcatcttggaagctggagaaacactgcaacaggaagtgacgtattttcgttgggttcttcgccagattcaaaag
ttttgcgccgacaacagagggacctcgcctttatcgttcaagagatccaaatggagcgagccctttaaggtcttcctata
tgactgttggttactaagaatggacgaaataacatttcatgatttcttacgaatcagacaatatccagaatatcggcata
tagatcatgaattatcagcagaacttaaacgtcattttgaatctatatatttacgccatagcaaaaatcttaattcccga
taa

Protein
Protein IDpfu_aug1.0_2488.1_30130.t1
Definition-
>pfu_aug1.0_2488.1_30130.t1
MLDLYDTNLNWRSNKKYEETSIKMNVPLLRDKPGTKQWNSSEYIRLKDKLYQNVGPTDKLYQRVGLSDKLYQHVAPTDKL
YQRVGPTDKLYQHVGPTDKLYQRVGLTDKLNHVRRNISDGAKDTVSSRVNNVVFLKLHKSASTTVQNIFLRYGFFRNLSF
VLPRPPGYYWRNVISLNDTVTKRNILPPPKNRTFNILCSHVIYNRTVFRPLMPQNTKFIGIIREPRAQFMSTLKYIRPHE
VFDSGGDPLENYFKNPRRYESLDPRQSLTNNRMAVEFGFPLKLFQTRNSSEIQQYIQKLNKEFDLVILVEKIDESLILMK
RILRWNIRDIIYITQNKNEKKDSRFNWTNETERRFHAWNYIDIELYNYFKTKMYQRILEAGETLQQEVTYFRWVLRQIQK
FCADNRGTSPLSFKRSKWSEPFKVFLYDCWLLRMDEITFHDFLRIRQYPEYRHIDHELSAELKRHFESIYLRHSKNLNSR

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