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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2495.1_22991
Locus scaffold2495.1 : 6331 ... 7081 : +
To GenomeBrowser scaffold2495.1:6331..7081
Genes list of scaffold scaffold2495.1
Synonym NA

Manual annotation
Study fieldBiomineralization
Gene nameN19-B2
DescriptionNCBI BLASTP best hit to BAK57311
mRNA evidence

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2495.1_22991.t1 gi|342330738|dbj|BAK57311.1| nacre protein [Pinctada fucata] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 1

Transcript
Transcript IDpfu_aug1.0_2495.1_22991.t1
Definition-
>pfu_aug1.0_2495.1_22991.t1
atggccagatttcaactcgatcttaaaattggcgaaattaaatacgagtatttttgctgtaaattgccaaagaaaaccac
acagttttcgttcaaaacttttttcactgatgatgggaatggtcacgttgcctacctggacagacagactgtgaactgtg
gcaacagagcagtcataaccggttttaatttacaaagaaatgtgcaaggaaaccgggtcagatacaacgtgatttgtcgg
gagtttgttaacgtcagttaccttaaatgctacagctccgcaacctcatggcaggctgaacaaaatggccacgtacatgc
ccttactaagcacaatgtcaagtgttcaagcggatatttcatcaacaagttctcattacagcgaaatgctttgtatcagc
tcagataccagtaccgatgctgtaagccatag

Protein
Protein IDpfu_aug1.0_2495.1_22991.t1
Definition-
>pfu_aug1.0_2495.1_22991.t1
MARFQLDLKIGEIKYEYFCCKLPKKTTQFSFKTFFTDDGNGHVAYLDRQTVNCGNRAVITGFNLQRNVQGNRVRYNVICR
EFVNVSYLKCYSSATSWQAEQNGHVHALTKHNVKCSSGYFINKFSLQRNALYQLRYQYRCCKP

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