Gene
| Gene Model ID | pfu_aug1.0_24977.1_04410 |
|---|---|
| Locus | scaffold24977.1 : 1 ... 15601 : + |
| To GenomeBrowser | scaffold24977.1:1..15601 |
| Genes list of scaffold | scaffold24977.1 |
| Synonym | pfu_aug2.0_23.1_10127 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_24977.1_04410.t1 | 2 | 1 | MFS_1 | 2 | 88 | 1.9e-21 | 76.1 | 1.2e-21 | 5.9e-18 | 64.7 |
| pfu_aug1.0_24977.1_04410.t1 | 3 | 1 | Sugar_tr | 2 | 85 | 1.5e-07 | 30.4 | 2.9e-11 | 1.5e-07 | 30.4 |
| pfu_aug1.0_24977.1_04410.t1 | 3 | 2 | Sugar_tr | 73 | 108 | 1.5e-07 | 30.4 | 0.0015 | 7.2 | 5.0 |
| pfu_aug1.0_24977.1_04410.t1 | 2 | 2 | MFS_1 | 129 | 224 | 1.9e-21 | 76.1 | 2.0e-07 | 0.001 | 17.8 |
| pfu_aug1.0_24977.1_04410.t1 | 3 | 3 | Sugar_tr | 168 | 212 | 1.5e-07 | 30.4 | 0.11 | 540.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_24977.1_04410.t1 | gi|193718439|ref|XP_001950266.1| | PREDICTED: major facilitator superfamily domain-containing protein 10 [Acyrthosiphon pisum] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_24977.1_04410.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24977.1_04410.t1 gtttgataggatcactattctcctttcttcaattcctggcttcccctgtgatgggtgctgcctcagatgtatatgggagg aaaccagtccttgtcatctctatgattggagtagcaatgtcctatgcactatgggccatatcacataattttacattgtt tgtctttgctcgtattgttggagggctgagtaaaggcaatgtcagtctgtctacagctgttgtagctgatatattcccac ctgaaaagagaggaagaggaatggccaagtctatatcatcaggttggcagaaaacgtcccatctcatcaatcctatatca ttattcaaattttcctccgtagaaaaaatctcaaaagcagatttgagctcgttacagcatataggcagcatttattttct atatctactgatgtactcaggtttagaatttactctgacattccttgttcataacagacttagctataatagtatgcagc aagggcgcatgttcttttacattggcacagtaatggccttagtgcaaggagggtatgtacggaggattccggcaggcaag gaaaccaaaatagccaccatgggacttacccttttgatacctgcctttataatgatggcctttgcccaaactgcttggtt gatgtaccttggtctcactttatttgcatttgtagccccttggaatcattcctccaaaatacattaa |
|
Protein
| Protein ID | pfu_aug1.0_24977.1_04410.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_24977.1_04410.t1 LIGSLFSFLQFLASPVMGAASDVYGRKPVLVISMIGVAMSYALWAISHNFTLFVFARIVGGLSKGNVSLSTAVVADIFPP EKRGRGMAKSISSGWQKTSHLINPISLFKFSSVEKISKADLSSLQHIGSIYFLYLLMYSGLEFTLTFLVHNRLSYNSMQQ GRMFFYIGTVMALVQGGYVRRIPAGKETKIATMGLTLLIPAFIMMAFAQTAWLMYLGLTLFAFVAPWNHSSKIH |
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