Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2499.1_51698
Locus scaffold2499.1 : 6457 ... 15585 : -
To GenomeBrowser scaffold2499.1:6457..15585
Genes list of scaffold scaffold2499.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2499.1_51698.t1 1 1 Peptidase_M2 15 64 1.3e-09 36.8 1.9e-13 1.4e-09 36.7

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
8-16cell 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_2499.1_51698.t1
Definition-
>pfu_aug1.0_2499.1_51698.t1
atgaaaatcaagtataaagttgtgacggactttaatcacagaaggggtctggcagacatgattaccacatccagaaacta
cacacagttattgatgggatggaaagcctggagggacgctacagggaaaaaattaaaggacaaatataagactttcgtta
aactgttgaatgagggaatccaaacaatgggagattgcaaagcaattccggcctatagattgacgatgtccgtctgtctg
tctgtccgtccgtccgtctgccgtcaacattttggttaa

Protein
Protein IDpfu_aug1.0_2499.1_51698.t1
Definition-
>pfu_aug1.0_2499.1_51698.t1
MKIKYKVVTDFNHRRGLADMITTSRNYTQLLMGWKAWRDATGKKLKDKYKTFVKLLNEGIQTMGDCKAIPAYRLTMSVCL
SVRPSVCRQHFG

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