Gene
| Gene Model ID | pfu_aug1.0_250.1_58040 |
|---|---|
| Locus | scaffold250.1 : 44106 ... 62624 : + |
| To GenomeBrowser | scaffold250.1:44106..62624 |
| Genes list of scaffold | scaffold250.1 |
| Synonym | pfu_aug2.0_14450.1_03182 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_250.1_58040.t1 | 2 | 1 | Thi4 | 33 | 79 | 1.3e-07 | 30.9 | 1.7e-09 | 1.4e-06 | 27.5 |
| pfu_aug1.0_250.1_58040.t1 | 3 | 1 | K_oxygenase | 41 | 74 | 1.3e-11 | 44.0 | 0.087 | 72.0 | 2.1 |
| pfu_aug1.0_250.1_58040.t1 | 1 | 1 | FMO-like | 42 | 524 | 0.0 | 324.0 | 0.0 | 0.0 | 323.6 |
| pfu_aug1.0_250.1_58040.t1 | 1 | 1 | Pyr_redox_2 | 42 | 275 | 3.7e-10 | 40.0 | 2.1e-11 | 1.7e-08 | 34.5 |
| pfu_aug1.0_250.1_58040.t1 | 3 | 1 | DAO | 42 | 77 | 8.4e-07 | 28.2 | 1.2e-07 | 9.6e-05 | 21.4 |
| pfu_aug1.0_250.1_58040.t1 | 2 | 1 | Pyr_redox_3 | 44 | 259 | 4.8e-22 | 79.0 | 4.7e-24 | 3.9e-21 | 76.0 |
| pfu_aug1.0_250.1_58040.t1 | 1 | 1 | NAD_binding_8 | 45 | 92 | 8.6e-09 | 35.2 | 2.9e-11 | 2.4e-08 | 33.8 |
| pfu_aug1.0_250.1_58040.t1 | 2 | 1 | NAD_binding_9 | 45 | 187 | 6.9e-07 | 29.1 | 4.3e-07 | 0.00036 | 20.3 |
| pfu_aug1.0_250.1_58040.t1 | 3 | 1 | Amino_oxidase | 50 | 92 | 5.3e-06 | 25.7 | 4.0e-06 | 0.0033 | 16.5 |
| pfu_aug1.0_250.1_58040.t1 | 3 | 2 | K_oxygenase | 110 | 257 | 1.3e-11 | 44.0 | 2.0e-11 | 1.6e-08 | 33.8 |
| pfu_aug1.0_250.1_58040.t1 | 3 | 2 | Amino_oxidase | 134 | 187 | 5.3e-06 | 25.7 | 0.017 | 14.0 | 4.5 |
| pfu_aug1.0_250.1_58040.t1 | 3 | 2 | DAO | 140 | 340 | 8.4e-07 | 28.2 | 0.031 | 26.0 | 3.5 |
| pfu_aug1.0_250.1_58040.t1 | 2 | 2 | Thi4 | 223 | 244 | 1.3e-07 | 30.9 | 0.25 | 210.0 | 0.8 |
| pfu_aug1.0_250.1_58040.t1 | 2 | 2 | Pyr_redox_3 | 309 | 366 | 4.8e-22 | 79.0 | 0.68 | 560.0 | 0.4 |
| pfu_aug1.0_250.1_58040.t1 | 3 | 3 | Amino_oxidase | 325 | 364 | 5.3e-06 | 25.7 | 0.25 | 200.0 | 0.7 |
| pfu_aug1.0_250.1_58040.t1 | 3 | 3 | DAO | 328 | 373 | 8.4e-07 | 28.2 | 0.27 | 220.0 | 0.5 |
| pfu_aug1.0_250.1_58040.t1 | 2 | 2 | NAD_binding_9 | 337 | 366 | 6.9e-07 | 29.1 | 0.013 | 11.0 | 5.8 |
| pfu_aug1.0_250.1_58040.t1 | 3 | 3 | K_oxygenase | 351 | 367 | 1.3e-11 | 44.0 | 0.019 | 15.0 | 4.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_250.1_58040.t1 | gi|115620353|ref|XP_783722.2| | PREDICTED: dimethylaniline monooxygenase [N-oxide-forming] 5 [Strongylocentrotus purpuratus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_250.1_58040.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_250.1_58040.t1 atgtccggaaaccattttcaatcatcagaatcctatgaccttgacctttggaccccaaaatcaataggggtcatccttga ctcaaacttcaaaataaatatgtcgatagaaaatataaaaacggatgtgatcgtcatcggagccggaatatcaggacttg cgactgttaaatgtctgagagacgatggattccgagttatagtcctggagagaactagtgaagtcggaggactttggact tttagggaacatgactacggtgtaatgcgcttcactcacatcaatgtatcaaagtataactacagtttttcggattttcc atttccggacgagacagcggacttcccacatcactcggatatggcaaagtatatcctagactatactaaacactttcagt tgagagaacacatcaaatttcgtagaaaagtcatcaaattagaacaaacaggggacaacttaggatggcgggtgacaaca cagatactggatgaagatggtgagcccacggattctgaggaaatttacgaggccagatacgtggctgtagcctctgggca ccacgccaaacccgttgtggcgtcattcaatggactggacacatttacagggaaaacaatccacagtgttgatttcaaag acgctgttaccaacggcatggagggaaagagagttctggtcgttggtattggtaacagtggtgtagatgtcgccaccaac tgtgcttcagagggaaggtgtaaatcagtgtatttgagtacacgatcgggtgcttggatttatcctaactatatcgcggg tagagccacggatctgtatgcctgtagagctttcctcaactatattccatggaccataggatcaacaatatttgaaacca tcgtatcatttcttctaggacatcccaggaagtggaagctaaatcccaagatgcgagccttacagactcagcctacagtc agccctaccctgatacatcatatacaaaggagacacatcaaaattgtaccaaatatcaaaaaaatcgaagaaaatagagt gacgtttatcaatgacgaaagcgctgagtttgacgccattgtcttgtgtacgggatacaagattgatctccctttcctgg aagagtctgtgcgttcaaaagtactagacgaagagacaaattctattaagctctacatgaatatggtgagtccagagatt ggtcatagtctggcctttataggatttatccagccggcgtcaggtggtctactctccatgtctgaaaatcaggccagatg gttcacagagctgtgtagaggacgtgtcagtctcccaaccaaggccgaaatgaaacagaatatacaagacgaggaggctg aaaatgcgagcaaatactacaaatcatctcgtcataccatccagagggacccaatcatctacaacgatcagataacctca ttctttggtgccaaaccagaactactcaaaaatccaaccttggcatggaggttaatggtgggatcttgtggttcagcgca gtatcgcctccaaggtcccggatcttggaagggtgccaaggagaccgtaatgaaagttcccgtaacagagatgatgcact acagcctcttactgacagtgttactgatcccactcgccatctactggatcttctccttcctttgttttcttgttacatga |
|
Protein
| Protein ID | pfu_aug1.0_250.1_58040.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_250.1_58040.t1 MSGNHFQSSESYDLDLWTPKSIGVILDSNFKINMSIENIKTDVIVIGAGISGLATVKCLRDDGFRVIVLERTSEVGGLWT FREHDYGVMRFTHINVSKYNYSFSDFPFPDETADFPHHSDMAKYILDYTKHFQLREHIKFRRKVIKLEQTGDNLGWRVTT QILDEDGEPTDSEEIYEARYVAVASGHHAKPVVASFNGLDTFTGKTIHSVDFKDAVTNGMEGKRVLVVGIGNSGVDVATN CASEGRCKSVYLSTRSGAWIYPNYIAGRATDLYACRAFLNYIPWTIGSTIFETIVSFLLGHPRKWKLNPKMRALQTQPTV SPTLIHHIQRRHIKIVPNIKKIEENRVTFINDESAEFDAIVLCTGYKIDLPFLEESVRSKVLDEETNSIKLYMNMVSPEI GHSLAFIGFIQPASGGLLSMSENQARWFTELCRGRVSLPTKAEMKQNIQDEEAENASKYYKSSRHTIQRDPIIYNDQITS FFGAKPELLKNPTLAWRLMVGSCGSAQYRLQGPGSWKGAKETVMKVPVTEMMHYSLLLTVLLIPLAIYWIFSFLCFLVT |
|