Gene
| Gene Model ID | pfu_aug1.0_2506.1_51704 |
|---|---|
| Locus | scaffold2506.1 : 11681 ... 20005 : - |
| To GenomeBrowser | scaffold2506.1:11681..20005 |
| Genes list of scaffold | scaffold2506.1 |
| Synonym | pfu_aug2.0_401.1_04103 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2506.1_51704.t1 | 1 | 1 | CBM_14 | 249 | 299 | 1.2e-08 | 34.7 | 1.3e-12 | 1.9e-08 | 34.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2506.1_51704.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2506.1_51704.t1 atgcatattgttctatcagaaaatattagcaaaccatatgcgcatttaaacaagttatgtctcatcagtgatgttcgaga taccacaaaagctgccacacgtaatatgctgcaaacggcaacgtcaaaacgctacaaagacgatgacacccagacaatta ttccagacatatctacaaatgatctgaatatcaaacattttgatgatcaatcaacgtcctcaattctgtcctcattgcca tttctatcaacttctcggcaagattttacatcatcgagtttgatagcactggaagatcagcaaacatatgaaaggaaaac aacaccagcagctaagcaaacatcagttgataattcaatatcagtttttaattcaacatcatttgataagtcaatatcaa cggataagccatcattaacggataagacaacatccactgataagtcaacatcaataagtgtgtcaccatcaacagaccac tcaacatcaacagatgagtcaacatcaacaaatgagtcaacattaacagataaatcaacatcaacaaatgagtcaacctc aacaaatgagtcaacatcaacagataagtcaacaacaacactcaaatcaggatcattatctcaatcgacattatcctatc agtcagcgtcactaagagattatctggaacaatcgactttaatctctgtatcatccagtacttcagagtccccaacgact gtagagtcagatccctgtaaacctgataaacatgatgtgtttcttcctgttagtagtgattgtcatatgttttacaggtg tatatatggagactcgtacaaattccagtgtgctggaaacactgtatttcatgcgaaattgaatttgtgtaattttaacg atggaagtgtgaaatgttag |
|
Protein
| Protein ID | pfu_aug1.0_2506.1_51704.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2506.1_51704.t1 MHIVLSENISKPYAHLNKLCLISDVRDTTKAATRNMLQTATSKRYKDDDTQTIIPDISTNDLNIKHFDDQSTSSILSSLP FLSTSRQDFTSSSLIALEDQQTYERKTTPAAKQTSVDNSISVFNSTSFDKSISTDKPSLTDKTTSTDKSTSISVSPSTDH STSTDESTSTNESTLTDKSTSTNESTSTNESTSTDKSTTTLKSGSLSQSTLSYQSASLRDYLEQSTLISVSSSTSESPTT VESDPCKPDKHDVFLPVSSDCHMFYRCIYGDSYKFQCAGNTVFHAKLNLCNFNDGSVKC |
|