Gene
| Gene Model ID | pfu_aug1.0_2506.1_51705 |
|---|---|
| Locus | scaffold2506.1 : 21899 ... 41005 : - |
| To GenomeBrowser | scaffold2506.1:21899..41005 |
| Genes list of scaffold | scaffold2506.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2506.1_51705.t1 | 5 | 1 | EGF_CA | 111 | 132 | 4.6e-28 | 96.9 | 2.2e-09 | 4.1e-06 | 26.6 |
| pfu_aug1.0_2506.1_51705.t1 | 5 | 1 | EGF | 111 | 133 | 7.0e-21 | 73.8 | 5.1e-09 | 9.5e-06 | 25.4 |
| pfu_aug1.0_2506.1_51705.t1 | 4 | 1 | hEGF | 124 | 135 | 1.5e-07 | 31.0 | 3.4e-06 | 0.0064 | 16.5 |
| pfu_aug1.0_2506.1_51705.t1 | 5 | 2 | EGF_CA | 138 | 171 | 4.6e-28 | 96.9 | 9.6e-09 | 1.8e-05 | 24.6 |
| pfu_aug1.0_2506.1_51705.t1 | 5 | 2 | EGF | 142 | 170 | 7.0e-21 | 73.8 | 3.9e-06 | 0.0072 | 16.2 |
| pfu_aug1.0_2506.1_51705.t1 | 4 | 2 | hEGF | 161 | 173 | 1.5e-07 | 31.0 | 0.00072 | 1.3 | 9.2 |
| pfu_aug1.0_2506.1_51705.t1 | 5 | 3 | EGF_CA | 176 | 199 | 4.6e-28 | 96.9 | 6.2e-06 | 0.011 | 15.6 |
| pfu_aug1.0_2506.1_51705.t1 | 5 | 3 | EGF | 180 | 195 | 7.0e-21 | 73.8 | 0.0052 | 9.6 | 6.2 |
| pfu_aug1.0_2506.1_51705.t1 | 5 | 4 | EGF_CA | 201 | 230 | 4.6e-28 | 96.9 | 2.6e-08 | 4.9e-05 | 23.2 |
| pfu_aug1.0_2506.1_51705.t1 | 5 | 4 | EGF | 207 | 233 | 7.0e-21 | 73.8 | 3.8e-08 | 7.0e-05 | 22.7 |
| pfu_aug1.0_2506.1_51705.t1 | 4 | 3 | hEGF | 223 | 235 | 1.5e-07 | 31.0 | 0.00027 | 0.5 | 10.5 |
| pfu_aug1.0_2506.1_51705.t1 | 5 | 5 | EGF_CA | 238 | 270 | 4.6e-28 | 96.9 | 9.7e-11 | 1.8e-07 | 31.0 |
| pfu_aug1.0_2506.1_51705.t1 | 5 | 5 | EGF | 246 | 273 | 7.0e-21 | 73.8 | 9.5e-10 | 1.8e-06 | 27.8 |
| pfu_aug1.0_2506.1_51705.t1 | 4 | 4 | hEGF | 262 | 274 | 1.5e-07 | 31.0 | 8.4e-05 | 0.16 | 12.1 |
Transcript
| Transcript ID | pfu_aug1.0_2506.1_51705.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2506.1_51705.t1 atgtcgcttggacaggaatcattcaaaacaacaaatagtcaacagcaggataggaatagtcctaccatgacgtcatattc cgatgacgtgggaatgttactacagagacgaggcagactgagctccattaacgagttggacgaaggggatgtaaccactg tcaaggtatccttgccaatctacaacagaaccttttccccagctatgacacaaaaatcttcacttcagtataagatcatt gctgaaccattgtgcaacgagttaacgatgtatatacagaaagaatacaaaacggaaaattctgttttctgctctgttat cagcataagaaacggtggggaatgtcacaacactataggatcgtaccggtgtagctgtccaccaggctgggtaggagagg actgccatgaggacgtggatgaatgttcctcgtctccttgttatggaatgtcatcttgttttaattatccagggtctttt tcttgtgaatgtacagctgaatggacaggaaccaagtgcaataatgatttagatgaatgcttgtcatcgccgtgtttgaa taatggaacatgctacaatgataatggaaccttcaagtatattgacgagtgtcaatttcaaccctgcatgaacaatggaa catgctacaattaccatggcacgtatagttgtgagtgttcgactggatggtttggggaactgtgtgagatcgactttgac gaatgtgcagcaatcgacccgtgtttgcacaacagttcctgtcaaaaccttccaggctccttcagttgtaactgcacgga gggatggtcaggggatacgtgtaacacggatttcgtatcaacaaatttgacattcaaagtccttaactggaataaatcaa ttgaagacacttcttcttcaaagattttcctgtcatattcatcaaatttttgtgaagagctttgctacgaggataaggat gaagggacgcggaattccacttgcctccgcttcgtctcttcgaattcaagcgtcatgttatggtatgatcgtcagttgaa tcgttttcaaatagacatttttcatcgtgacgaacttcgcacttcgaacttcgtacttcgaacattgaaaaatcagtgga gtagctgtcattcacgtataaactcataa |
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Protein
| Protein ID | pfu_aug1.0_2506.1_51705.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2506.1_51705.t1 MSLGQESFKTTNSQQQDRNSPTMTSYSDDVGMLLQRRGRLSSINELDEGDVTTVKVSLPIYNRTFSPAMTQKSSLQYKII AEPLCNELTMYIQKEYKTENSVFCSVISIRNGGECHNTIGSYRCSCPPGWVGEDCHEDVDECSSSPCYGMSSCFNYPGSF SCECTAEWTGTKCNNDLDECLSSPCLNNGTCYNDNGTFKYIDECQFQPCMNNGTCYNYHGTYSCECSTGWFGELCEIDFD ECAAIDPCLHNSSCQNLPGSFSCNCTEGWSGDTCNTDFVSTNLTFKVLNWNKSIEDTSSSKIFLSYSSNFCEELCYEDKD EGTRNSTCLRFVSSNSSVMLWYDRQLNRFQIDIFHRDELRTSNFVLRTLKNQWSSCHSRINS |
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