Gene
| Gene Model ID | pfu_aug1.0_25084.1_26216 |
|---|---|
| Locus | scaffold25084.1 : 3156 ... 11057 : + |
| To GenomeBrowser | scaffold25084.1:3156..11057 |
| Genes list of scaffold | scaffold25084.1 |
| Synonym | pfu_aug2.0_81.1_03570 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_25084.1_26216.t1 | 1 | 1 | Sec23_trunk | 207 | 436 | 0.0 | 265.6 | 0.0 | 0.0 | 265.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_25084.1_26216.t1 | gi|115712785|ref|XP_783728.2| | PREDICTED: protein transport protein Sec24C [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_25084.1_26216.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25084.1_26216.t1 atgagtggttttcctccgatgccaaatacctcatcaggccctcaacctccaaatatgggcccaccatcaaattttggccc cccaacaagtatgggtcaaccatctagttttggccctccctcaggtgttggtcctccaacaagtatgggccccccatcaa gtatggggcccccttcaagtatgggccctcctacaagtaggtatggtggatttccgccctctagtatggcaggccctcca ggtaatatgccacccaccacagccagcatgccaccaactggctttggacaatccacaggatatcaaccaatgggaggcca gcagggtccaccaagtggccccggtatgataccacctcctccaacctcatccacagatgcctttcagacacaagcaggtt ttccacctcagccaggacaaatgagtaatcagccaccgggtcagtttctggctccttctacgcatggccagtttgtacca ggatcattgccggggcaacaaggattcacctatcagccccaccaggggcagcctaagatgggggcaccgtcatccatgca acaaccagccccaaaaaaactggacccagaccagatgccaagtcctaatggtgtaatgcccaagcctccagcttttattt tcatgattgatgtatcatataatgcagtaaaaagtggtttaaccaatctgatatgtgagagattaaaagatgatgtcctt gttaacctaccaaaggaatctggtgctgatgagtcggaaattcgagtcggttttgtgacatatgcaaaagaaattcattt ttataatgtcaagggcagtttagcacaaccccagatgttagtagtgtcggatttagatgatgtatttgtacctttgttag atggttttctagttacactttcagaatcagaagctgtgattgacagtttgttgtctcaaattccccaaatgtttatggag tctcgtgagacagaaaccattctaggacctgtgatacaagccggactggatgccctgaaatcggcagactgttgtggtaa actgtatatattccacacttcactgccaatagctgaagctccaggaaaactgaaaaaccgagaagatagaaaactactcg gaacagaaaaagaaaaaaccatactgactccacagaacaatttctacaccaaccttgggaaggaatgtgtagcggcaggt tgtagcgtagatatattcctcttccccaactcgtacatagacgttgcttcaatgtcggaggtctgtcgactcaccggagg aaatatgtataaatatagctatttccaggtacgttaa |
|
Protein
| Protein ID | pfu_aug1.0_25084.1_26216.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_25084.1_26216.t1 MSGFPPMPNTSSGPQPPNMGPPSNFGPPTSMGQPSSFGPPSGVGPPTSMGPPSSMGPPSSMGPPTSRYGGFPPSSMAGPP GNMPPTTASMPPTGFGQSTGYQPMGGQQGPPSGPGMIPPPPTSSTDAFQTQAGFPPQPGQMSNQPPGQFLAPSTHGQFVP GSLPGQQGFTYQPHQGQPKMGAPSSMQQPAPKKLDPDQMPSPNGVMPKPPAFIFMIDVSYNAVKSGLTNLICERLKDDVL VNLPKESGADESEIRVGFVTYAKEIHFYNVKGSLAQPQMLVVSDLDDVFVPLLDGFLVTLSESEAVIDSLLSQIPQMFME SRETETILGPVIQAGLDALKSADCCGKLYIFHTSLPIAEAPGKLKNREDRKLLGTEKEKTILTPQNNFYTNLGKECVAAG CSVDIFLFPNSYIDVASMSEVCRLTGGNMYKYSYFQVR |
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