Gene
| Gene Model ID | pfu_aug1.0_2511.1_15847 |
|---|---|
| Locus | scaffold2511.1 : 30866 ... 32051 : + |
| To GenomeBrowser | scaffold2511.1:30866..32051 |
| Genes list of scaffold | scaffold2511.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2511.1_15847.t1 | 1 | 1 | Histone | 29 | 98 | 9.7e-25 | 86.4 | 2.8e-28 | 1.4e-24 | 85.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2511.1_15847.t1 | gi|2564106|gb|AAC15915.1| | histone H2B [Chaetopterus variopedatus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2511.1_15847.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2511.1_15847.t1 atgccgcctaaagtagcaagcaagggctctaaaaaggcgatttctaagtcagcaaagccttcatcaggggataataaacg taaaaggaagagaaaggagagttatggcttgtatatttacaaagtattacgccaagttcacccagacacgggtatatcaa gtaaaggcatgtctatcatgaacagcttcgtcaatgacgtgttcgaaaggatagcagcggaagcttccagactggctaat tacaacaagcggtcaacaatcactagcagggagattcagactgcagtgaggttactgttacctggagaactggccaaaca cgccgtcagcgaggggactaaagctgtgacgaagtacacaagtaccaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_2511.1_15847.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2511.1_15847.t1 MPPKVASKGSKKAISKSAKPSSGDNKRKRKRKESYGLYIYKVLRQVHPDTGISSKGMSIMNSFVNDVFERIAAEASRLAN YNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSTK |
|